myRT

myRT report for GCA_000958095.1_ASM95809v1

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Seq: JZYW01000036.1 Enterobacter hormaechei subsp. steigerwaltii strain 35703 contig36, whole genome shotgun sequence (8287 bp)
Overview 1 RT 1: 4127-7330 bp Neighborhood of RT #1 [4127, 7722] umuC PRK10276 RVT-GII Feature: gene Location: 4127-5398 bp Ori: KJM99427.1 Feature: domain Description: umuC Location: 4130-5390 bp Feature: domain Description: umuC Location: 41 30-5390 bp Feature: gene Location: 5398-5829 bp Ori: KJM99428.1 Feature: domain Description: PRK10276 Location: 5449-5812 bp Feature: domain Description: PRK1 0276 Location: 5449-581 2 bp Feature: gene Location: 6238-7722 bp Ori: KJM99429.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6640-7330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6640-7330 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT umuC (PRK03609), PRK10276 (translesion error-prone DNA polymerase V autoproteolytic subunit), RVT-GII

Seq: JZYW01000003.1 Enterobacter hormaechei subsp. steigerwaltii strain 35703 contig3, whole genome shotgun sequence (231118 bp)
Overview 1 RT 1: 28477-36469 bp Neighborhood of RT #1 [28477, 36480] COG5301 COG5301 Caudo_TAP RVT-Retrons AAA_15 FI Feature: gene Location: 28477-30354 bp Ori: KJN11961.1 Feature: domain Description: COG5301 Location: 28480-29398 bp Feature: domain Description: COG5301 Location: 2 8480-2 9398 bp Feature: domain Description: COG5301 Location: 29710-30133 bp Feature: domain Description: COG5301 Location: 2 9710-30133 bp Feature: gene Location: 30358-30885 bp Ori: KJN11962.1 Feature: domain Description: Caudo_TAP Location: 30478-30883 bp Feature: domain Description: Caudo_TAP Location: 30478-30883 bp Feature: gene Location: 31308-32405 bp Ori: KJN11963.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 31482-32025 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 31482 -32 02 5 bp Feature: gene Location: 32526-34790 bp Ori: KJN11964.1 Feature: domain Description: AAA_15 Location: 32529-33552 bp Feature: domain Description: AAA_15 Location: 32 52 9-33552 bp Feature: gene Location: 35290-36480 bp Ori: KJN11965.1 Feature: domain Description: FI Location: 35293-36469 bp Feature: domain Description: FI Location: 352 93-36469 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG5301 (Phage-related tail fibre protein ), Caudo_TAP (pfam02413), RVT-Retrons, AAA_15 (pfam13175), FI (PHA02560)

Seq: JZYW01000015.1 Enterobacter hormaechei subsp. steigerwaltii strain 35703 contig15, whole genome shotgun sequence (483956 bp)
Overview 1 RT 1: 421834-427073 bp Neighborhood of RT #1 [421834, 427073] PRK13687 AdoMet_MTases RVT-UG17 SLATT_5 Feature: gene Location: 421834-422091 bp Ori: KJN06532.1 Feature: domain Description: PRK13687 Location: 421837-422089 bp Feature: domain Description: PRK13 687 Location: 42183 7-422089 bp Feature: gene Location: 422102-422848 bp Ori: KJN06533.1 Feature: domain Description: AdoMet_MTases Location: 422219-422729 bp Feature: domain Description: AdoMet_MTases Location: 422219-422729 bp Feature: gene Location: 424115-425485 bp Ori: KJN06534.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 424343-424949 bp Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 4243 43 -424949 bp Feature: gene Location: 425475-426014 bp Ori: KJN06535.1 Feature: domain Description: SLATT_5 Location: 425481-425994 bp Feature: domain Description: SLATT_5 Location: 425481-425994 bp Feature: gene Location: 426684-427073 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK13687 (hypothetical protein; Provisional), AdoMet_MTases (cl17173), RVT-UG17, SLATT_5 (pfam18160)