myRT

myRT report for GCA_000958595.1_AF91

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Seq: JMMS01000022.1 Vibrio parahaemolyticus strain AF91 AF91_22, whole genome shotgun sequence (150719 bp)
Overview 1 RT 1: 147614-150494 bp Neighborhood of RT #1 [147614, 150718] COG3950 COG3950 TIGR02646 RVT-GII GIIM Feature: gene Location: 147614-148843 bp Feature: domain Description: COG3950 Location: 147668-147887 bp Feature: domain Description: COG3950 Location: 1 47668-1 47887 bp Feature: domain Description: COG3950 Location: 148037-148565 bp Feature: domain Description: COG3950 Location: 1 48037-1 48565 bp Feature: gene Location: 148848-149513 bp Feature: domain Description: TIGR02646 Location: 148905-149076 bp Feature: domain Description: TIGR02646 Location: 1 48905-1 49076 bp Feature: gene Location: 149729-150718 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 149735-150209 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 49735-1 50209 bp Feature: domain Description: GIIM Note: maturase Location: 150269-150494 bp Feature: domain Description: GIIM Note: maturase Location: 1 50269-1 50494 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3950 (Predicted ATP-binding protein involved in virulence ), TIGR02646 (TIGR02646 family protein), RVT-GII, GIIM (pfam08388)

Seq: JMMS01000087.1 Vibrio parahaemolyticus strain AF91 AF91_87, whole genome shotgun sequence (1507 bp)
Overview 1 RT 1: 2-920 bp Neighborhood of RT #1 [2, 919] RVT_N RVT-GII Feature: gene Location: 2-919 bp Feature: RT Description: RVT_N Location: 50-293 bp Feature: RT Description: RVT_N Location: 50-2 93 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 338-920 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 338-92 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII