myRT

myRT report for GCA_000960085.1_ASM96008v1

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Seq: JYGT01000002.1 Streptococcus infantis strain UC921A TZ94_contig000002, whole genome shotgun sequence (107682 bp)
Overview 1 RT 1: 52074-57638 bp Neighborhood of RT #1 [52074, 57838] COG4709 PadR RVT-Retrons MFS_NIMT_CynX_like GT2_AmsE_like Feature: gene Location: 52074-52667 bp Ori: KJQ78416.1 Feature: domain Description: COG4709 Location: 52077-52650 bp Feature: domain Description: COG4709 Location: 52077-52650 bp Feature: gene Location: 52654-52980 bp Ori: KJQ78417.1 Feature: domain Description: PadR Location: 52681-52945 bp Feature: domain Description: PadR Location: 52681 -52945 bp Feature: gene Location: 53189-55246 bp Ori: KJQ78418.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 53318-54071 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 5331 8-54071 bp Feature: gene Location: 55623-56789 bp Ori: KJQ78419.1 Feature: domain Description: MFS_NIMT_CynX_like Location: 55650-56766 bp Feature: domain Description: MFS_NIMT_CynX_like Location: 55650-56766 bp Feature: gene Location: 57008-57838 bp Ori: KJQ78420.1 Gene: csp2K Feature: domain Description: GT2_AmsE_like Location: 57032-57638 bp Feature: domain Description: GT2_AmsE_like Location: 57032-57638 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4709 (Uncharacterized membrane protein ), PadR (pfam03551), RVT-Retrons, MFS_NIMT_CynX_like (cd17339), GT2_AmsE_like (cd04195)

Seq: JYGT01000004.1 Streptococcus infantis strain UC921A TZ94_contig000004, whole genome shotgun sequence (165090 bp)
Overview 1 RT 1: 51942-59446 bp Neighborhood of RT #1 [51942, 59475] NfsA_FRP Der RVT-UG8 RVT-UG3 TPM_phosphatase LemA Feature: gene Location: 51942-52655 bp Ori: KJQ78155.1 Gene: frp Feature: domain Description: NfsA_FRP Location: 51954-52608 bp Feature: domain Description: NfsA_FRP Location: 51954-52 608 bp Feature: gene Location: 52669-53979 bp Ori: KJQ78156.1 Gene: engA Feature: domain Description: Der Location: 52675-53977 bp Feature: domain Description: Der Location: 52 675-53977 bp Feature: gene Location: 54206-56290 bp Ori: KJQ78157.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 54725-55172 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 5472 5-55172 bp Feature: gene Location: 56529-57761 bp Ori: KJQ78158.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 56733-57192 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 56733-57192 bp Feature: gene Location: 58000-58842 bp Ori: KJQ78159.1 Feature: domain Description: TPM_phosphatase Location: 58114-58483 bp Feature: domain Description: TPM_phosphatase Location: 58114-58483 bp Feature: gene Location: 58882-59475 bp Ori: KJQ78160.1 Feature: domain Description: LemA Location: 58912-59446 bp Feature: domain Description: LemA Location: 58912 -59446 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NfsA_FRP, Der (COG1160), RVT-UG8, RVT-UG3, TPM_phosphatase (pfam04536), LemA (pfam04011)