myRT

myRT report for GCA_000967475.1_S2604

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Seq: JXXT01000021.1 Vibrio nigripulchritudo strain S2604 contig0021, whole genome shotgun sequence (243430 bp)
Overview 1 RT 1: 192192-201315 bp Neighborhood of RT #1 [192192, 201315] ARO8 PRK11453 RVT-UG3 RVT-UG8 ispZ Feature: gene Location: 192192-193499 bp Ori: KJY75223.1 Feature: domain Description: ARO8 Location: 192195-193494 bp Feature: domain Description: ARO8 Location: 1 921 95-1 93494 bp Feature: gene Location: 193668-194558 bp Ori: KJY75224.1 Feature: domain Description: PRK11453 Location: 193671-194496 bp Feature: domain Description: PRK1 1 453 Location: 1 93671 -1 94496 bp Feature: gene Location: 196273-197511 bp Ori: KJY75225.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 196561-197044 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 1 96561 -1 97044 bp Feature: gene Location: 197501-199471 bp Ori: KJY75226.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 198005-198455 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 1 98005-1 98455 bp Feature: gene Location: 200070-200765 bp Ori: KJY75227.1 Feature: domain Description: ispZ Location: 200142-200430 bp Feature: domain Description: ispZ Location: 2001 42-200430 bp Feature: gene Location: 200932-201315 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ARO8 (COG1167), PRK11453 (O-acetylserine/cysteine exporter), RVT-UG3, RVT-UG8, ispZ (TIGR00997)

Seq: JXXT01000014.1 Vibrio nigripulchritudo strain S2604 contig0014, whole genome shotgun sequence (475134 bp)
Overview 1 RT 1: 190224-203190 bp Neighborhood of RT #1 [190224, 203528] WGR_DNA_ligase HEAT_2 RVT-Retrons SpoIVFB TPR Peptidase_C39A PEP_TPR_lipo TPR TPR TPR TPR TPR TPR_19 Fis1 Feature: gene Location: 190224-193268 bp Ori: KJY78655.1 Feature: domain Description: WGR_DNA_ligase Location: 190227-190416 bp Feature: domain Description: WGR_DNA_ligase Location: 1902 2 7-190416 bp Feature: domain Description: HEAT_2 Location: 190485-190701 bp Feature: domain Description: HEAT_2 Location: 190485-190701 bp Feature: gene Location: 193265-194920 bp Feature: gene Location: 195329-197179 bp Ori: KJY78657.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 195932-196547 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 195932 -196547 bp Feature: gene Location: 197237-198316 bp Ori: KJY78658.1 Feature: domain Description: SpoIVFB Location: 197564-198242 bp Feature: domain Description: SpoIVFB Location: 197564-1982 42 bp Feature: gene Location: 198555-203528 bp Ori: KJY78659.1 Feature: domain Description: TPR Location: 199071-199407 bp Feature: domain Description: TPR Location: 199071-199407 bp Feature: domain Description: Peptidase_C39A Location: 199500-199824 bp Feature: domain Description: Peptidase_C39A Location: 199500-19982 4 bp Feature: domain Description: PEP_TPR_lipo Location: 200391-200691 bp Feature: domain Description: PEP_TPR_lipo Location: 2 00391-2 00691 bp Feature: domain Description: TPR Location: 200769-201027 bp Feature: domain Description: TPR Location: 2 00769-2 0102 7 bp Feature: domain Description: TPR Location: 201054-201366 bp Feature: domain Description: TPR Location: 2 01054-2 01366 bp Feature: domain Description: TPR Location: 201417-201642 bp Feature: domain Description: TPR Location: 2 01417-2 01642 bp Feature: domain Description: TPR Location: 201669-201891 bp Feature: domain Description: TPR Location: 2 01669-2 01891 bp Feature: domain Description: TPR Location: 201993-202269 bp Feature: domain Description: TPR Location: 2 01993-2 02 2 69 bp Feature: domain Description: TPR_19 Location: 202422-202539 bp Feature: domain Description: TPR_19 Location: 2 02 42 2 -2 02 539 bp Feature: domain Description: Fis1 Location: 203097-203190 bp Feature: domain Description: Fis1 Location: 2 03097-2 03190 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WGR_DNA_ligase (cd07998), HEAT_2 (pfam13646), RVT-Retrons, SpoIVFB (COG1994), TPR (smart00028), Peptidase_C39A (cd02549), PEP_TPR_lipo (TIGR02917), TPR_19 (pfam14559), Fis1 (cl21750)

Seq: JXXT01000002.1 Vibrio nigripulchritudo strain S2604 contig0002, whole genome shotgun sequence (634759 bp)
Overview 1 RT 1: 147490-153135 bp Neighborhood of RT #1 [147490, 153530] RRM_HP0827_like RVT-Retrons DUF3800 KOG2647 Feature: gene Location: 147490-147729 bp Ori: KJY80879.1 Feature: domain Description: RRM_HP0827_like Location: 147496-147724 bp Feature: domain Description: RRM_HP0827_like Location: 147496-147724 bp Feature: gene Location: 147916-148419 bp Feature: gene Location: 148814-150667 bp Ori: KJY80881.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 148952-149669 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 148952-149669 bp Feature: gene Location: 151006-152043 bp Ori: KJY80882.1 Feature: domain Description: DUF3800 Location: 151045-151687 bp Feature: domain Description: DUF3 800 Location: 151045-151687 bp Feature: gene Location: 152385-153530 bp Ori: KJY81288.1 Feature: domain Description: KOG2647 Location: 152547-153135 bp Feature: domain Description: KOG2647 Location: 152547-153 13 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RRM_HP0827_like (cd12399), RVT-Retrons, DUF3800 (pfam12686), KOG2647 (KOG2647, Predicted Dolichyl-phosphate-mannose-protein mannosyltransferase )