myRT

myRT report for GCA_000967555.1_S2040

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Seq: JXXW01000010.1 Pseudoalteromonas piscicida strain S2040 contig0010, whole genome shotgun sequence (150159 bp)
Overview 1 RT 1: 67458-79180 bp Neighborhood of RT #1 [67458, 79197] TIGR03986 CRISPR_Cas6 RVT-CRISPR NtrY Feature: gene Location: 67458-69509 bp Ori: KJY91326.1 Feature: domain Description: TIGR03986 Location: 67539-69261 bp Feature: domain Description: TIGR03986 Location: 67539-69261 bp Feature: gene Location: 69520-71376 bp Feature: gene Location: 71385-73319 bp Ori: KJY91328.1 Feature: domain Description: CRISPR_Cas6 Location: 71838-72195 bp Feature: domain Description: CRISPR_Cas6 Location: 71 838-721 95 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 72423-72981 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 72423-72981 bp Feature: gene Location: 74892-76868 bp Feature: gene Location: 77860-79197 bp Ori: KJY91330.1 Feature: domain Description: NtrY Location: 77962-79180 bp Feature: domain Description: NtrY Location: 77962-791 80 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TIGR03986 (CRISPR-associated protein), CRISPR_Cas6 (pfam10040), RVT-CRISPR, NtrY (COG5000)

Seq: JXXW01000105.1 Pseudoalteromonas piscicida strain S2040 contig0108, whole genome shotgun sequence (1973 bp)
Overview 1 RT 1: 84-1251 bp Neighborhood of RT #1 [84, 1421] RVT-GII GIIM Feature: gene Location: 84-1421 bp Ori: KJY82158.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 363-981 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 363-981 bp Feature: domain Description: GIIM Note: maturase Location: 1023-1251 bp Feature: domain Description: GIIM Note: maturase Location: 102 3-12 51 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)