myRT

myRT report for GCA_000967645.1_S2151

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Seq: JXYB01000090.1 Halomonas sp. S2151 contig0090, whole genome shotgun sequence (29183 bp)
Overview 1 RT 1: 9194-15753 bp Neighborhood of RT #1 [9194, 15776] Sulf_transp Sulf_transp DUF1090 RVT_N RVT-GII GIIM HNHc sensory_box PAS Tar AzlD Feature: gene Location: 9194-10120 bp Feature: domain Description: Sulf_transp Location: 9275-9554 bp Feature: domain Description: Sulf_transp Location: 9275-9554 bp Feature: domain Description: Sulf_transp Location: 9596-10073 bp Feature: domain Description: Sulf_transp Location: 9596-1 0073 bp Feature: gene Location: 10247-10654 bp Feature: domain Description: DUF1090 Location: 10298-10598 bp Feature: domain Description: DUF1 090 Location: 1 0298-1 0598 bp Feature: gene Location: 11144-12790 bp Feature: RT Description: RVT_N Location: 11192-11435 bp Feature: RT Description: RVT_N Location: 1 1 1 92-1 1 435 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11480-12101 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 480-1 21 01 bp Feature: domain Description: GIIM Note: maturase Location: 12155-12386 bp Feature: domain Description: GIIM Note: maturase Location: 1 21 55-1 2386 bp Feature: domain Description: HNHc Note: nucleases Location: 12581-12737 bp Feature: domain Description: HNHc Note: nucleases Location: 1 2581 -1 2737 bp Feature: gene Location: 13823-15076 bp Feature: domain Description: sensory_box Location: 13856-14189 bp Feature: domain Description: sensory_box Location: 1 3856-1 41 89 bp Feature: domain Description: PAS Location: 14222-14360 bp Feature: domain Description: PAS Location: 1 4222-1 4360 bp Feature: domain Description: Tar Location: 14507-15068 bp Feature: domain Description: Tar Location: 1 4507-1 5068 bp Feature: gene Location: 15432-15776 bp Feature: domain Description: AzlD Location: 15447-15753 bp Feature: domain Description: AzlD Location: 1 5447-1 5753 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1090 (pfam06476), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), sensory_box (TIGR00229), PAS (smart00091), Tar (COG0840), AzlD (pfam05437)