myRT

myRT report for GCA_000967725.1_S4079

Download annotations/find similar RTs

Seq: JXYE01000018.1 Loktanella sp. S4079 contig0018, whole genome shotgun sequence (9368 bp)
Overview 1 RT 1: 934-6397 bp Neighborhood of RT #1 [934, 6411] YurZ SLATT_5 RVT-UG13 DDE_Tnp_IS66 DDE_Tnp_IS66_C HTH_35 Feature: gene Location: 934-1317 bp Ori: KJZ17237.1 Feature: domain Description: YurZ Location: 988-1309 bp Feature: domain Description: YurZ Location: 988-1 309 bp Feature: gene Location: 1552-2349 bp Ori: KJZ17238.1 Feature: domain Description: SLATT_5 Location: 1666-2209 bp Feature: domain Description: SLATT_5 Location: 1 666-2209 bp Feature: gene Location: 2346-3350 bp Ori: KJZ17239.1 Feature: RT Description: RVT-UG13 Note: UG13 RT Location: 2352-2829 bp Feature: RT Description: RVT-UG1 3 Note: UG1 3 RT Location: 2352-2829 bp Feature: gene Location: 4151-5755 bp Ori: KJZ17240.1 Feature: domain Description: DDE_Tnp_IS66 Location: 4661-5543 bp Feature: domain Description: DDE_Tnp_IS66 Location: 4661 -5543 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 5561-5690 bp Feature: domain Description: DDE_Tnp_IS66_C Location: 5561 -5690 bp Feature: gene Location: 6121-6411 bp Ori: KJZ17241.1 Feature: domain Description: HTH_35 Location: 6205-6397 bp Feature: domain Description: HTH_35 Location: 6205-6397 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YurZ (COG0599), SLATT_5 (pfam18160), RVT-UG13, DDE_Tnp_IS66 (pfam03050), DDE_Tnp_IS66_C (pfam13817), HTH_35 (pfam13693)

Seq: JXYE01000004.1 Loktanella sp. S4079 contig0004, whole genome shotgun sequence (209894 bp)
Overview 1 RT 1: 201466-207999 bp Neighborhood of RT #1 [201466, 207999] MnuA_DNase1-like RVT-UG8 RVT-UG3 Feature: gene Location: 201466-202503 bp Ori: KJZ18981.1 Feature: domain Description: MnuA_DNase1-like Location: 201487-202465 bp Feature: domain Description: MnuA_DNase1-like Location: 2 01487-2 02 465 bp Feature: gene Location: 202598-203398 bp Feature: gene Location: 203654-205660 bp Ori: KJZ18983.1 Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 204185-204632 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 2 04185-2 04632 bp Feature: gene Location: 205653-206477 bp Ori: KJZ18984.1 Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 205665-206013 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 2 05665-2 06013 bp Feature: gene Location: 206493-206885 bp Feature: gene Location: 207190-207999 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MnuA_DNase1-like (cd10283), RVT-UG8, RVT-UG3