myRT

myRT report for GCA_000968885.2_ASM96888v2

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Seq: JZWP02000037.1 Escherichia fergusonii strain GTA-EF04 contig_7, whole genome shotgun sequence (310411 bp)
Overview 1 RT 1: 166973-170853 bp 2 RT 2: 196533-201381 bp Neighborhood of RT #1 [166973, 170858] dut slmA RVT-Retrons pyrE rph Neighborhood of RT #2 [196533, 201419] DUF5375 Prim_Zn_Ribbon COG3378 RVT-Retrons TIR_2 Feature: gene Location: 166973-167431 bp Ori: KWV98452.1 Feature: domain Description: dut Location: 166979-167426 bp Feature: domain Description: dut Location: 1 66979-1 67426 bp Feature: gene Location: 167538-168134 bp Ori: KWV98453.1 Gene: slmA Feature: domain Description: slmA Location: 167544-168120 bp Feature: domain Description: slmA Location: 1 67544-1 681 20 bp Feature: gene Location: 168178-169137 bp Ori: KWV98454.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 168313-168862 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 6831 3-1 68862 bp Feature: gene Location: 169435-170076 bp Ori: KWV98455.1 Gene: pyrE Feature: domain Description: pyrE Location: 169438-170071 bp Feature: domain Description: pyrE Location: 1 69438-1 70071 bp Feature: gene Location: 170142-170858 bp Ori: KWV98456.1 Gene: rph Feature: domain Description: rph Location: 170145-170853 bp Feature: domain Description: rph Location: 1 701 45-1 70853 bp Feature: gene Location: 196533-196853 bp Ori: KWV98480.1 Feature: domain Description: DUF5375 Location: 196536-196851 bp Feature: domain Description: DUF5375 Location: 1 96536-1 96851 bp Feature: gene Location: 196868-199201 bp Ori: KWV98481.1 Feature: domain Description: Prim_Zn_Ribbon Location: 196958-197066 bp Feature: domain Description: Prim_Zn_Ribbon Location: 1 96958-1 97066 bp Feature: domain Description: COG3378 Location: 197675-199190 bp Feature: domain Description: COG3378 Location: 1 97675-1 991 90 bp Feature: gene Location: 199812-201419 bp Ori: KWV98482.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 200103-200700 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2001 03-200700 bp Feature: domain Description: TIR_2 Location: 201024-201381 bp Feature: domain Description: TIR_2 Location: 201 024-201 381 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173), DUF5375 (pfam17345), Prim_Zn_Ribbon (smart00778), COG3378 (Phage- or plasmid-associated DNA primase ), TIR_2 (pfam13676)