myRT

myRT report for GCA_000968895.2_ASM96889v2

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Seq: JZWN02000025.1 Escherichia fergusonii strain GTA-EF03 contig_5, whole genome shotgun sequence (279899 bp)
Overview 1 RT 1: 137898-141778 bp 2 RT 2: 161266-166083 bp Neighborhood of RT #1 [137898, 141783] dut slmA RVT-Retrons pyrE rph Neighborhood of RT #2 [161266, 166175] PRK09692 SLATT_5 RVT-UG17 Psu PRK09678 PRK09678 Feature: gene Location: 137898-138356 bp Ori: KWV99904.1 Feature: domain Description: dut Location: 137904-138351 bp Feature: domain Description: dut Location: 1 37904-1 38351 bp Feature: gene Location: 138463-139059 bp Ori: KWV99905.1 Gene: slmA Feature: domain Description: slmA Location: 138469-139045 bp Feature: domain Description: slmA Location: 1 38469-1 39045 bp Feature: gene Location: 139103-140062 bp Ori: KWV99906.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 139238-139787 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 39238-1 39787 bp Feature: gene Location: 140360-141001 bp Ori: KWV99907.1 Gene: pyrE Feature: domain Description: pyrE Location: 140363-140996 bp Feature: domain Description: pyrE Location: 1 40363-1 40996 bp Feature: gene Location: 141067-141783 bp Ori: KWV99908.1 Gene: rph Feature: domain Description: rph Location: 141070-141778 bp Feature: domain Description: rph Location: 1 41 070-1 41 778 bp Feature: gene Location: 161266-162444 bp Ori: KWV99923.1 Feature: domain Description: PRK09692 Location: 161275-162427 bp Feature: domain Description: PRK09692 Location: 1 61 275-1 62427 bp Feature: gene Location: 162461-163102 bp Ori: KWW00376.1 Feature: domain Description: SLATT_5 Location: 162464-163070 bp Feature: domain Description: SLATT_5 Location: 1 62464-1 63070 bp Feature: gene Location: 163297-164706 bp Ori: KWV99924.1 Feature: RT Description: RVT-UG17 Note: UG17 RT Location: 163534-164146 bp Feature: RT Description: RVT-UG1 7 Note: UG1 7 RT Location: 1 63534-1 641 46 bp Feature: gene Location: 165029-165601 bp Ori: KWV99925.1 Feature: domain Description: Psu Location: 165047-165584 bp Feature: domain Description: Psu Location: 1 65047-1 65584 bp Feature: gene Location: 165675-166175 bp Ori: KWV99926.1 Feature: domain Description: PRK09678 Location: 165678-165810 bp Feature: domain Description: PRK09678 Location: 1 65678-1 6581 0 bp Feature: domain Description: PRK09678 Location: 165933-166083 bp Feature: domain Description: PRK09678 Location: 1 65933-1 66083 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT dut (TIGR00576), slmA (PRK09480), RVT-Retrons, pyrE (TIGR00336), rph (PRK00173), PRK09692 (Integrase; provisional), SLATT_5 (pfam18160), RVT-UG17, Psu (pfam07455), PRK09678 (DNA-binding transcriptional regulator; Provisional)