myRT

myRT report for GCA_000969825.1_Para_gord_MS-1_V1

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Seq: KQ033921.1 Parabacteroides gordonii MS-1 genomic scaffold aczIC-supercont1.3, whole genome shotgun sequence (244721 bp)
Overview 1 RT 1: 79090-84927 bp Neighborhood of RT #1 [79090, 84971] DUF3876 Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G DUF4133 Feature: gene Location: 79090-79452 bp Feature: domain Description: DUF3876 Location: 79156-79426 bp Feature: domain Description: DUF3876 Location: 791 56-79426 bp Feature: gene Location: 79660-80112 bp Feature: domain Description: Bac_Flav_CT_G Location: 79678-80104 bp Feature: domain Description: Bac_Flav_CT_G Location: 79678-801 04 bp Feature: gene Location: 80190-82001 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80454-81276 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 80454-81 276 bp Feature: domain Description: Intron_maturas2 Location: 81348-81672 bp Feature: domain Description: Intron_maturas2 Location: 81 348-81 672 bp Feature: domain Description: HNHc Note: nucleases Location: 81810-81972 bp Feature: domain Description: HNHc Note: nucleases Location: 81 81 0-81 972 bp Feature: gene Location: 82549-84651 bp Feature: domain Description: Bac_Flav_CT_G Location: 82552-84637 bp Feature: domain Description: Bac_Flav_CT_G Location: 82552-84637 bp Feature: gene Location: 84648-84971 bp Feature: domain Description: DUF4133 Location: 84663-84927 bp Feature: domain Description: DUF41 33 Location: 84663-84927 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3876 (pfam12992), Bac_Flav_CT_G (TIGR03783), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), DUF4133 (pfam13571)

Seq: KQ033920.1 Parabacteroides gordonii MS-1 genomic scaffold aczIC-supercont1.2, whole genome shotgun sequence (1798680 bp)
Overview 1 RT 1: 316278-322274 bp 2 RT 2: 369193-375428 bp 3 RT 3: 477190-483581 bp 4 RT 4: 1122494-1130010 bp 5 RT 5: 1223578-1229340 bp 6 RT 6: 1435317-1441868 bp 7 RT 7: 1661499-1667433 bp Neighborhood of RT #1 [316278, 322351] NfeD YqiK RVT-GII Intron_maturas2 HNHc PduO PHP_HisPPase_Hisj_like Neighborhood of RT #2 [369193, 375514] DUF2461 BaFpgNei_N_3 PRK13945 RVT-GII Intron_maturas2 HNHc Zn_ribbon_2 AraC AraC_E_bind AbiEii Neighborhood of RT #3 [477190, 483655] DUF4141 Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like Neighborhood of RT #4 [1122494, 1130183] Avd_like RVT-DGRs DUF4906 BACON BACON BACON BACON BACON BACON DUF1566 Mfa_like_1 Neighborhood of RT #5 [1223578, 1229360] TolC RVT-GII Intron_maturas2 HNHc OEP OEP RND_mfp Neighborhood of RT #6 [1435317, 1441868] GH130 SLC5sbd_u1 RVT-GII Intron_maturas2 HNHc SLC5sbd_u1 Neighborhood of RT #7 [1661499, 1667492] NTP-PPase_RS21-C6_like DUF2075 RVT-GII Intron_maturas2 HNHc DUF2075 mpi Feature: gene Location: 316278-316772 bp Feature: domain Description: NfeD Location: 316500-316767 bp Feature: domain Description: NfeD Location: 316500-316767 bp Feature: gene Location: 316807-318402 bp Feature: domain Description: YqiK Location: 316813-318289 bp Feature: domain Description: YqiK Location: 316813-3182 89 bp Feature: gene Location: 318927-320738 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 319191-320013 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 319191-32 0013 bp Feature: domain Description: Intron_maturas2 Location: 320085-320409 bp Feature: domain Description: Intron_maturas2 Location: 32 0085-32 0409 bp Feature: domain Description: HNHc Note: nucleases Location: 320547-320709 bp Feature: domain Description: HNHc Note: nucleases Location: 32 0547-32 0709 bp Feature: gene Location: 320915-321481 bp Feature: domain Description: PduO Location: 320918-321455 bp Feature: domain Description: PduO Location: 32 0918-32 1455 bp Feature: gene Location: 321506-322351 bp Feature: domain Description: PHP_HisPPase_Hisj_like Location: 321521-322274 bp Feature: domain Description: PHP_HisPPase_Hisj_like Location: 32 152 1-32 2 2 74 bp Feature: gene Location: 369193-369864 bp Feature: domain Description: DUF2461 Location: 369211-369832 bp Feature: domain Description: DUF2 461 Location: 3692 11-369832 bp Feature: gene Location: 369868-370695 bp Feature: domain Description: BaFpgNei_N_3 Location: 369877-370222 bp Feature: domain Description: BaFpgNei_N_3 Location: 369877-3702 2 2 bp Feature: domain Description: PRK13945 Location: 370276-370690 bp Feature: domain Description: PRK13945 Location: 3702 76-370690 bp Feature: gene Location: 371428-373239 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 371692-372514 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 371692 -372 514 bp Feature: domain Description: Intron_maturas2 Location: 372586-372910 bp Feature: domain Description: Intron_maturas2 Location: 372 586-372 910 bp Feature: domain Description: HNHc Note: nucleases Location: 373048-373210 bp Feature: domain Description: HNHc Note: nucleases Location: 373048-3732 10 bp Feature: gene Location: 373304-374341 bp Feature: domain Description: Zn_ribbon_2 Location: 373331-373589 bp Feature: domain Description: Zn_ribbon_2 Location: 373331-373589 bp Feature: domain Description: AraC Location: 373613-373925 bp Feature: domain Description: AraC Location: 373613-37392 5 bp Feature: domain Description: AraC_E_bind Location: 373979-374294 bp Feature: domain Description: AraC_E_bind Location: 373979-3742 94 bp Feature: gene Location: 374555-375514 bp Feature: domain Description: AbiEii Location: 374666-375428 bp Feature: domain Description: AbiEii Location: 374666-37542 8 bp Feature: gene Location: 477190-477816 bp Feature: domain Description: DUF4141 Location: 477202-477355 bp Feature: domain Description: DUF4141 Location: 4772 02 -477355 bp Feature: gene Location: 477828-478298 bp Feature: domain Description: Bac_Flav_CT_G Location: 477846-478272 bp Feature: domain Description: Bac_Flav_CT_G Location: 477846-4782 72 bp Feature: gene Location: 478376-480187 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 478640-479462 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 478640-479462 bp Feature: domain Description: Intron_maturas2 Location: 479534-479858 bp Feature: domain Description: Intron_maturas2 Location: 479534-479858 bp Feature: domain Description: HNHc Note: nucleases Location: 479996-480158 bp Feature: domain Description: HNHc Note: nucleases Location: 479996-480158 bp Feature: gene Location: 481186-482421 bp Feature: domain Description: Arm-DNA-bind_5 Location: 481213-481471 bp Feature: domain Description: Arm-DNA-bind_5 Location: 4812 13-481471 bp Feature: domain Description: Phage_int_SAM_5 Location: 481510-481825 bp Feature: domain Description: Phage_int_SAM_5 Location: 481510-48182 5 bp Feature: domain Description: INTN1_C_like Location: 481867-482347 bp Feature: domain Description: INTN1_C_like Location: 481867-482 347 bp Feature: gene Location: 482429-483655 bp Feature: domain Description: Arm-DNA-bind_5 Location: 482456-482708 bp Feature: domain Description: Arm-DNA-bind_5 Location: 482 456-482 708 bp Feature: domain Description: Phage_int_SAM_5 Location: 482801-483056 bp Feature: domain Description: Phage_int_SAM_5 Location: 482 801-483056 bp Feature: domain Description: INTN1_C_like Location: 483110-483581 bp Feature: domain Description: INTN1_C_like Location: 483110-483581 bp Feature: gene Location: 1122494-1123003 bp Feature: gene Location: 1123016-1123360 bp Feature: domain Description: Avd_like Location: 1123046-1123349 bp Feature: domain Description: Avd_like Location: 112 3046-112 3349 bp Feature: gene Location: 1123344-1124714 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 1123533-1124340 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 112 3533-112 4340 bp Feature: gene Location: 1125787-1129014 bp Feature: domain Description: DUF4906 Location: 1126258-1126855 bp Feature: domain Description: DUF4906 Location: 112 62 58-112 6855 bp Feature: domain Description: BACON Location: 1126915-1127191 bp Feature: domain Description: BACON Location: 112 6915-112 7191 bp Feature: domain Description: BACON Location: 1127245-1127512 bp Feature: domain Description: BACON Location: 112 72 45-112 7512 bp Feature: domain Description: BACON Location: 1127548-1127764 bp Feature: domain Description: BACON Location: 112 7548-112 7764 bp Feature: domain Description: BACON Location: 1127812-1128106 bp Feature: domain Description: BACON Location: 112 7812 -112 8106 bp Feature: domain Description: BACON Location: 1128127-1128403 bp Feature: domain Description: BACON Location: 112 812 7-112 8403 bp Feature: domain Description: BACON Location: 1128442-1128676 bp Feature: domain Description: BACON Location: 112 8442 -112 8676 bp Feature: domain Description: DUF1566 Location: 1128733-1129006 bp Feature: domain Description: DUF1566 Location: 112 8733-112 9006 bp Feature: gene Location: 1129029-1130183 bp Feature: domain Description: Mfa_like_1 Location: 1129434-1130010 bp Feature: domain Description: Mfa_like_1 Location: 112 9434-1130010 bp Feature: gene Location: 1223578-1224153 bp Feature: gene Location: 1224519-1224776 bp Feature: domain Description: TolC Location: 1224567-1224750 bp Feature: domain Description: TolC Location: 12 2 4567-12 2 4750 bp Feature: gene Location: 1224841-1226652 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1225105-1225927 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 2 5105-12 2 592 7 bp Feature: domain Description: Intron_maturas2 Location: 1225999-1226323 bp Feature: domain Description: Intron_maturas2 Location: 12 2 5999-12 2 632 3 bp Feature: domain Description: HNHc Note: nucleases Location: 1226461-1226623 bp Feature: domain Description: HNHc Note: nucleases Location: 12 2 6461-12 2 662 3 bp Feature: gene Location: 1227237-1228301 bp Feature: domain Description: OEP Location: 1227285-1227678 bp Feature: domain Description: OEP Location: 12 2 72 85-12 2 7678 bp Feature: domain Description: OEP Location: 1227756-1228296 bp Feature: domain Description: OEP Location: 12 2 7756-12 2 82 96 bp Feature: gene Location: 1228323-1229360 bp Feature: domain Description: RND_mfp Location: 1228473-1229340 bp Feature: domain Description: RND_mfp Location: 12 2 8473-12 2 9340 bp Feature: gene Location: 1435317-1436315 bp Feature: domain Description: GH130 Location: 1435449-1436286 bp Feature: domain Description: GH130 Location: 1435449-14362 86 bp Feature: gene Location: 1436352-1437071 bp Feature: domain Description: SLC5sbd_u1 Location: 1436358-1436787 bp Feature: domain Description: SLC5sbd_u1 Location: 1436358-1436787 bp Feature: gene Location: 1437213-1439024 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1437477-1438299 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1437477-14382 99 bp Feature: domain Description: Intron_maturas2 Location: 1438371-1438695 bp Feature: domain Description: Intron_maturas2 Location: 1438371-1438695 bp Feature: domain Description: HNHc Note: nucleases Location: 1438833-1438995 bp Feature: domain Description: HNHc Note: nucleases Location: 1438833-1438995 bp Feature: gene Location: 1439586-1440788 bp Feature: domain Description: SLC5sbd_u1 Location: 1439604-1440783 bp Feature: domain Description: SLC5sbd_u1 Location: 1439604-1440783 bp Feature: gene Location: 1440981-1441868 bp Feature: gene Location: 1661499-1661828 bp Feature: domain Description: NTP-PPase_RS21-C6_like Location: 1661529-1661769 bp Feature: domain Description: NTP-PPase_RS2 1-C6_like Location: 166152 9-1661769 bp Feature: gene Location: 1661839-1663083 bp Feature: domain Description: DUF2075 Location: 1662682-1663039 bp Feature: domain Description: DUF2 075 Location: 1662 682 -1663039 bp Feature: gene Location: 1663608-1665419 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1663872-1664694 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1663872 -1664694 bp Feature: domain Description: Intron_maturas2 Location: 1664766-1665090 bp Feature: domain Description: Intron_maturas2 Location: 1664766-1665090 bp Feature: domain Description: HNHc Note: nucleases Location: 1665228-1665390 bp Feature: domain Description: HNHc Note: nucleases Location: 16652 2 8-1665390 bp Feature: gene Location: 1665904-1666266 bp Feature: domain Description: DUF2075 Location: 1665910-1666225 bp Feature: domain Description: DUF2 075 Location: 1665910-16662 2 5 bp Feature: gene Location: 1666848-1667492 bp Feature: domain Description: mpi Location: 1666851-1667433 bp Feature: domain Description: mpi Location: 1666851-1667433 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NfeD (pfam01957), YqiK (COG2268), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PduO (COG2096), PHP_HisPPase_Hisj_like (cd12110), DUF2461 (pfam09365), BaFpgNei_N_3 (cd08975), PRK13945 (formamidopyrimidine-DNA glycosylase; Provisional)
Zn_ribbon_2 (pfam12674), AraC (COG2207), AraC_E_bind (smart00871), AbiEii (pfam08843), DUF4141 (pfam13605), Bac_Flav_CT_G (TIGR03783), Arm-DNA-bind_5 (pfam17293), Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), Avd_like (cd16376)
RVT-DGRs, DUF4906 (pfam16249), BACON (pfam13004), DUF1566 (pfam07603), Mfa_like_1 (pfam13149), TolC (COG1538), OEP (pfam02321), RND_mfp (TIGR01730), GH130 (cd18615), SLC5sbd_u1 (cd11477)
NTP-PPase_RS21-C6_like (cd11537), DUF2075 (pfam09848), mpi (PRK13413)

Seq: KQ033919.1 Parabacteroides gordonii MS-1 genomic scaffold aczIC-supercont1.1, whole genome shotgun sequence (4481443 bp)
Overview 1 RT 1: 32965-40773 bp 2 RT 2: 120832-131361 bp 3 RT 3: 2183842-2193547 bp 4 RT 4: 2970268-2977922 bp 5 RT 5: 3127573-3133937 bp 6 RT 6: 3788500-3795554 bp 7 RT 7: 3888426-3895352 bp Neighborhood of RT #1 [32965, 40799] pyrG PRK01318 RVT-GII Intron_maturas2 HNHc CMP-KDO-Synthetase Neighborhood of RT #2 [120832, 131501] KAP_NTPase KAP_NTPase RVT_N RVT-GII GIIM N6_Mtase COG4646 DUF4065 Neighborhood of RT #3 [2183842, 2193612] Peptidase_S46 COG1808 RVT-GII Intron_maturas2 HNHc BaeS RfbX Neighborhood of RT #4 [2970268, 2977942] STN OMP_RagA_SusC RVT-GII Intron_maturas2 HNHc FecR Sig70_bacteroi1 Neighborhood of RT #5 [3127573, 3133937] DUF4133 Bac_Flav_CT_G RVT-GII Intron_maturas2 HNHc Bac_Flav_CT_G Neighborhood of RT #6 [3788500, 3795616] MFS_XylE_like AraC_binding AraC RVT-GII Intron_maturas2 HNHc MviM MviM HU-DNA_bdg DUF4469 Neighborhood of RT #7 [3888426, 3895372] yebU Arm-DNA-bind_5 Phage_int_SAM_5 INTN1_C_like RVT-GII Intron_maturas2 HNHc Bacuni_01323_like Feature: gene Location: 32965-34569 bp Feature: domain Description: pyrG Location: 32977-34564 bp Feature: domain Description: pyrG Location: 3 2977-3 4564 bp Feature: gene Location: 34581-36479 bp Feature: domain Description: PRK01318 Location: 34584-36372 bp Feature: domain Description: PRK013 18 Location: 3 4584-3 63 72 bp Feature: gene Location: 37221-39032 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37485-38307 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 7485-3 83 07 bp Feature: domain Description: Intron_maturas2 Location: 38379-38703 bp Feature: domain Description: Intron_maturas2 Location: 3 83 79-3 8703 bp Feature: domain Description: HNHc Note: nucleases Location: 38841-39003 bp Feature: domain Description: HNHc Note: nucleases Location: 3 8841-3 9003 bp Feature: gene Location: 39227-40060 bp Feature: gene Location: 40041-40799 bp Feature: domain Description: CMP-KDO-Synthetase Location: 40047-40773 bp Feature: domain Description: CMP-KDO-Synthetase Location: 40047-40773 bp Feature: gene Location: 120832-122721 bp Feature: domain Description: KAP_NTPase Location: 120880-120967 bp Feature: domain Description: KAP_NTPase Location: 120880-120967 bp Feature: domain Description: KAP_NTPase Location: 121240-121516 bp Feature: domain Description: KAP_NTPase Location: 121240-121516 bp Feature: gene Location: 122963-124093 bp Feature: gene Location: 124044-125711 bp Feature: RT Description: RVT_N Location: 124098-124341 bp Feature: RT Description: RVT_N Location: 124098-1243 41 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 124386-125034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1243 86-12503 4 bp Feature: domain Description: GIIM Note: maturase Location: 125088-125319 bp Feature: domain Description: GIIM Note: maturase Location: 125088-1253 19 bp Feature: gene Location: 126368-130405 bp Feature: domain Description: N6_Mtase Location: 126860-127274 bp Feature: domain Description: N6_Mtase Location: 126860-127274 bp Feature: domain Description: COG4646 Location: 128057-129800 bp Feature: domain Description: COG4646 Location: 128057-129800 bp Feature: gene Location: 130944-131501 bp Feature: domain Description: DUF4065 Location: 131034-131361 bp Feature: domain Description: DUF4065 Location: 13 103 4-13 13 61 bp Feature: gene Location: 2183842-2185983 bp Feature: domain Description: Peptidase_S46 Location: 2183908-2185972 bp Feature: domain Description: Peptidase_S46 Location: 2183 908-2185972 bp Feature: gene Location: 2185993-2187351 bp Feature: domain Description: COG1808 Location: 2186104-2186791 bp Feature: domain Description: COG1808 Location: 2186104-2186791 bp Feature: gene Location: 2188124-2189935 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2188388-2189210 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 21883 88-2189210 bp Feature: domain Description: Intron_maturas2 Location: 2189282-2189606 bp Feature: domain Description: Intron_maturas2 Location: 2189282-2189606 bp Feature: domain Description: HNHc Note: nucleases Location: 2189744-2189906 bp Feature: domain Description: HNHc Note: nucleases Location: 2189744-2189906 bp Feature: gene Location: 2190074-2192116 bp Feature: domain Description: BaeS Location: 2191208-2192111 bp Feature: domain Description: BaeS Location: 2191208-2192111 bp Feature: gene Location: 2192119-2193612 bp Feature: domain Description: RfbX Location: 2192122-2193547 bp Feature: domain Description: RfbX Location: 2192122-2193 547 bp Feature: gene Location: 2970268-2973621 bp Feature: domain Description: STN Location: 2970418-2970562 bp Feature: domain Description: STN Location: 2970418-2970562 bp Feature: domain Description: OMP_RagA_SusC Location: 2970595-2973613 bp Feature: domain Description: OMP_RagA_SusC Location: 2970595-2973 613 bp Feature: gene Location: 2973728-2973856 bp Feature: gene Location: 2974493-2976304 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2974757-2975579 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2974757-2975579 bp Feature: domain Description: Intron_maturas2 Location: 2975651-2975975 bp Feature: domain Description: Intron_maturas2 Location: 2975651-2975975 bp Feature: domain Description: HNHc Note: nucleases Location: 2976113-2976275 bp Feature: domain Description: HNHc Note: nucleases Location: 2976113 -2976275 bp Feature: gene Location: 2976406-2977290 bp Feature: domain Description: FecR Location: 2976439-2977270 bp Feature: domain Description: FecR Location: 297643 9-2977270 bp Feature: gene Location: 2977379-2977942 bp Feature: domain Description: Sig70_bacteroi1 Location: 2977448-2977922 bp Feature: domain Description: Sig70_bacteroi1 Location: 2977448-2977922 bp Feature: gene Location: 3127573-3127905 bp Feature: domain Description: DUF4133 Location: 3127591-3127858 bp Feature: domain Description: DUF413 3 Location: 3 127591-3 127858 bp Feature: gene Location: 3127902-3129998 bp Feature: domain Description: Bac_Flav_CT_G Location: 3127905-3129984 bp Feature: domain Description: Bac_Flav_CT_G Location: 3 127905-3 129984 bp Feature: gene Location: 3130546-3132357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3130810-3131632 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 13 0810-3 13 163 2 bp Feature: domain Description: Intron_maturas2 Location: 3131704-3132028 bp Feature: domain Description: Intron_maturas2 Location: 3 13 1704-3 13 2028 bp Feature: domain Description: HNHc Note: nucleases Location: 3132166-3132328 bp Feature: domain Description: HNHc Note: nucleases Location: 3 13 2166-3 13 23 28 bp Feature: gene Location: 3132435-3132908 bp Feature: domain Description: Bac_Flav_CT_G Location: 3132456-3132876 bp Feature: domain Description: Bac_Flav_CT_G Location: 3 13 2456-3 13 2876 bp Feature: gene Location: 3132921-3133937 bp Feature: gene Location: 3788500-3789828 bp Feature: domain Description: MFS_XylE_like Location: 3788524-3789784 bp Feature: domain Description: MFS_XylE_like Location: 3 788524-3 789784 bp Feature: gene Location: 3789911-3790777 bp Feature: domain Description: AraC_binding Location: 3789992-3790301 bp Feature: domain Description: AraC_binding Location: 3 789992-3 7903 01 bp Feature: domain Description: AraC Location: 3790442-3790763 bp Feature: domain Description: AraC Location: 3 790442-3 790763 bp Feature: gene Location: 3790891-3792702 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3791155-3791977 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 791155-3 791977 bp Feature: domain Description: Intron_maturas2 Location: 3792049-3792373 bp Feature: domain Description: Intron_maturas2 Location: 3 792049-3 7923 73 bp Feature: domain Description: HNHc Note: nucleases Location: 3792511-3792673 bp Feature: domain Description: HNHc Note: nucleases Location: 3 792511-3 792673 bp Feature: gene Location: 3793435-3794802 bp Feature: domain Description: MviM Location: 3793588-3794221 bp Feature: domain Description: MviM Location: 3 793 588-3 794221 bp Feature: domain Description: MviM Location: 3794413-3794641 bp Feature: domain Description: MviM Location: 3 794413 -3 794641 bp Feature: gene Location: 3794861-3795616 bp Feature: domain Description: HU-DNA_bdg Location: 3794876-3795230 bp Feature: domain Description: HU-DNA_bdg Location: 3 794876-3 79523 0 bp Feature: domain Description: DUF4469 Location: 3795254-3795554 bp Feature: domain Description: DUF4469 Location: 3 795254-3 795554 bp Feature: gene Location: 3888426-3889814 bp Feature: domain Description: yebU Location: 3888564-3889758 bp Feature: domain Description: yebU Location: 3 888564-3 889758 bp Feature: gene Location: 3889991-3891184 bp Feature: domain Description: Arm-DNA-bind_5 Location: 3890042-3890240 bp Feature: domain Description: Arm-DNA-bind_5 Location: 3 890042-3 890240 bp Feature: domain Description: Phage_int_SAM_5 Location: 3890426-3890627 bp Feature: domain Description: Phage_int_SAM_5 Location: 3 890426-3 890627 bp Feature: domain Description: INTN1_C_like Location: 3890738-3891095 bp Feature: domain Description: INTN1_C_like Location: 3 89073 8-3 891095 bp Feature: gene Location: 3891709-3893520 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3891973-3892795 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 891973 -3 892795 bp Feature: domain Description: Intron_maturas2 Location: 3892867-3893191 bp Feature: domain Description: Intron_maturas2 Location: 3 892867-3 893 191 bp Feature: domain Description: HNHc Note: nucleases Location: 3893329-3893491 bp Feature: domain Description: HNHc Note: nucleases Location: 3 893 3 29-3 893 491 bp Feature: gene Location: 3893675-3894097 bp Feature: gene Location: 3894587-3895372 bp Feature: domain Description: Bacuni_01323_like Location: 3894749-3895352 bp Feature: domain Description: Bacuni_013 23 _like Location: 3 894749-3 8953 52 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pyrG (PRK05380), PRK01318 (membrane protein insertase; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), CMP-KDO-Synthetase (cd02517), KAP_NTPase (pfam07693), RVT_N (pfam13655), GIIM (pfam08388), N6_Mtase (pfam02384)
COG4646 (Adenine-specific DNA methylase, N12 class ), DUF4065 (pfam13274), Peptidase_S46 (pfam10459), COG1808 (Uncharacterized membrane protein ), BaeS (COG0642), RfbX (COG2244), STN (smart00965), OMP_RagA_SusC (TIGR04056), FecR (pfam04773), Sig70_bacteroi1 (TIGR02985)
DUF4133 (pfam13571), Bac_Flav_CT_G (TIGR03783), MFS_XylE_like (cd17359), AraC_binding (pfam02311), AraC (COG2207), MviM (COG0673), HU-DNA_bdg (pfam14848), DUF4469 (pfam14734), yebU (PRK11933), Arm-DNA-bind_5 (pfam17293)
Phage_int_SAM_5 (pfam13102), INTN1_C_like (cd01185), Bacuni_01323_like (cl25912)