myRT

myRT report for GCA_000969845.1_Para_sp_HGS0025_V1

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Seq: KQ033909.1 Parabacteroides sp. HGS0025 genomic scaffold aczIs-supercont1.8, whole genome shotgun sequence (30788 bp)
Overview 1 RT 1: 1-4670 bp Neighborhood of RT #1 [1, 4876] RVT-GII GIIM ArdA PRK07726 Feature: gene Location: 1-113 bp Feature: gene Location: 128-1531 bp Ori: KKB45056.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 470-1088 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 470-1 088 bp Feature: domain Description: GIIM Note: maturase Location: 1145-1373 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 45-1 373 bp Feature: gene Location: 1687-2214 bp Ori: KKB45057.1 Feature: domain Description: ArdA Location: 1714-2203 bp Feature: domain Description: ArdA Location: 1 71 4-2203 bp Feature: gene Location: 2768-4876 bp Ori: KKB45058.1 Feature: domain Description: PRK07726 Location: 2771-4670 bp Feature: domain Description: PRK07726 Location: 2771 -4670 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), ArdA (pfam07275), PRK07726 (DNA topoisomerase 3)

Seq: KQ033902.1 Parabacteroides sp. HGS0025 genomic scaffold aczIs-supercont1.1, whole genome shotgun sequence (4460853 bp)
Overview 1 RT 1: 2466970-2474659 bp 2 RT 2: 3207276-3213534 bp Neighborhood of RT #1 [2466970, 2474659] Mfa_like_1 BACON BACON BACON BACON BACON BACON DUF1566 RVT-DGRs Avd_like Neighborhood of RT #2 [3207276, 3213534] RVT-UG2 Feature: gene Location: 2466970-2468124 bp Ori: KKB51254.1 Feature: domain Description: Mfa_like_1 Location: 2467375-2467951 bp Feature: domain Description: Mfa_like_1 Location: 2 467375-2 467951 bp Feature: gene Location: 2468139-2471366 bp Ori: KKB51255.1 Feature: domain Description: BACON Location: 2469267-2469543 bp Feature: domain Description: BACON Location: 2 4692 67-2 469543 bp Feature: domain Description: BACON Location: 2469597-2469864 bp Feature: domain Description: BACON Location: 2 469597-2 469864 bp Feature: domain Description: BACON Location: 2469897-2470116 bp Feature: domain Description: BACON Location: 2 469897-2 470116 bp Feature: domain Description: BACON Location: 2470167-2470458 bp Feature: domain Description: BACON Location: 2 470167-2 470458 bp Feature: domain Description: BACON Location: 2470479-2470755 bp Feature: domain Description: BACON Location: 2 470479-2 470755 bp Feature: domain Description: BACON Location: 2470794-2471028 bp Feature: domain Description: BACON Location: 2 470794-2 47102 8 bp Feature: domain Description: DUF1566 Location: 2471085-2471358 bp Feature: domain Description: DUF1566 Location: 2 471085-2 471358 bp Feature: gene Location: 2472439-2473809 bp Ori: KKB51256.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2472628-2473381 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 472 62 8-2 473381 bp Feature: gene Location: 2473793-2474137 bp Ori: KKB51257.1 Feature: domain Description: Avd_like Location: 2473823-2474126 bp Feature: domain Description: Avd_like Location: 2 47382 3-2 47412 6 bp Feature: gene Location: 2474150-2474659 bp Feature: gene Location: 3207276-3207446 bp Feature: gene Location: 3208116-3208241 bp Feature: gene Location: 3208423-3209961 bp Ori: KKB51885.1 Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 3208630-3209539 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 32 08630-32 09539 bp Feature: gene Location: 3210377-3212083 bp Feature: gene Location: 3212086-3213534 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Mfa_like_1 (pfam13149), BACON (pfam13004), DUF1566 (pfam07603), RVT-DGRs, Avd_like (cd16376), RVT-UG2