myRT

myRT report for GCA_000970985.1_ASM97098v1

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Seq: LAKV01000045.1 Streptococcus dysgalactiae subsp. equisimilis strain UT-5345 contig00045, whole genome shotgun sequence (13733 bp)
Overview 1 RT 1: 4745-13608 bp Neighborhood of RT #1 [4745, 13625] N6_Mtase COG4646 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 4745-5296 bp Feature: gene Location: 5346-11249 bp Feature: domain Description: N6_Mtase Location: 7359-7947 bp Feature: domain Description: N6_Mtase Location: 7359-7947 bp Feature: domain Description: COG4646 Location: 8541-10845 bp Feature: domain Description: COG4646 Location: 8541 -1 0845 bp Feature: gene Location: 11814-13625 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12078-12900 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 2078-1 2900 bp Feature: domain Description: Intron_maturas2 Location: 12969-13443 bp Feature: domain Description: Intron_maturas2 Location: 1 2969-1 3443 bp Feature: domain Description: HNHc Note: nucleases Location: 13443-13608 bp Feature: domain Description: HNHc Note: nucleases Location: 1 3443-1 3608 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class )

Seq: LAKV01000067.1 Streptococcus dysgalactiae subsp. equisimilis strain UT-5345 contig00067, whole genome shotgun sequence (2433 bp)
Overview 1 RT 1: 56-1523 bp Neighborhood of RT #1 [56, 1858] RVT-GII Intron_maturas2 Feature: gene Location: 56-1858 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 332-1136 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 332 -1136 bp Feature: domain Description: Intron_maturas2 Location: 1244-1523 bp Feature: domain Description: Intron_maturas2 Location: 12 44-152 3 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348)

Seq: LAKV01000050.1 Streptococcus dysgalactiae subsp. equisimilis strain UT-5345 contig00050, whole genome shotgun sequence (12131 bp)
Overview 1 RT 1: 7605-11056 bp Neighborhood of RT #1 [7605, 11460] ssb RVT_N RVT-GII GIIM Feature: gene Location: 7605-8264 bp Feature: domain Description: ssb Location: 7851-8238 bp Feature: domain Description: ssb Location: 7851-823 8 bp Feature: gene Location: 8307-9656 bp Feature: gene Location: 9790-11460 bp Feature: RT Description: RVT_N Location: 9835-10078 bp Feature: RT Description: RVT_N Location: 983 5-10078 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10123-10771 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10123 -10771 bp Feature: domain Description: GIIM Note: maturase Location: 10825-11056 bp Feature: domain Description: GIIM Note: maturase Location: 10825-11056 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT ssb (TIGR00621), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)