myRT

myRT report for GCA_000971295.1_ASM97129v1

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Seq: LANJ01000022.1 Devosia epidermidihirudinis strain E84 contig22, whole genome shotgun sequence (32824 bp)
Overview 1 RT 1: 14174-20051 bp Neighborhood of RT #1 [14174, 20065] PRK05134 DUF4279 RVT-Retrons PRK06635 Feature: gene Location: 14174-14935 bp Ori: KKC36531.1 Feature: domain Description: PRK05134 Location: 14207-14924 bp Feature: domain Description: PRK051 34 Location: 1 4207-1 4924 bp Feature: gene Location: 15681-16001 bp Ori: KKC36532.1 Feature: domain Description: DUF4279 Location: 15687-15915 bp Feature: domain Description: DUF4279 Location: 1 5687-1 591 5 bp Feature: gene Location: 16417-17382 bp Ori: KKC36541.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 16501-17083 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 6501 -1 7083 bp Feature: gene Location: 17405-18169 bp Feature: gene Location: 18800-20065 bp Ori: KKC36534.1 Feature: domain Description: PRK06635 Location: 18806-20051 bp Feature: domain Description: PRK06635 Location: 1 8806-20051 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05134 (bifunctional 2-polyprenyl-6-hydroxyphenol methylase/3-demethylubiquinol 3-O-methyltransferase UbiG), DUF4279 (pfam14106), RVT-Retrons, PRK06635 (aspartate kinase; Reviewed)

Seq: LANJ01000002.1 Devosia epidermidihirudinis strain E84 contig2, whole genome shotgun sequence (120442 bp)
Overview 1 RT 1: 19715-26713 bp 2 RT 2: 93716-100690 bp Neighborhood of RT #1 [19715, 26727] RNase_HII_bacteria_HII_like YhdJ RVT-UG12 SpeE MutY Neighborhood of RT #2 [93716, 100728] MutY SpeE RVT-UG12 YhdJ RNase_HII_bacteria_HII_like Feature: gene Location: 19715-20311 bp Ori: KKC41313.1 Feature: domain Description: RNase_HII_bacteria_HII_like Location: 19745-20273 bp Feature: domain Description: RNase_HII_bacteria_HII_like Location: 19745-2 02 73 bp Feature: gene Location: 20430-21563 bp Ori: KKC41231.1 Feature: domain Description: YhdJ Location: 20493-21336 bp Feature: domain Description: YhdJ Location: 2 0493-2 1336 bp Feature: gene Location: 22397-24073 bp Ori: KKC41314.1 Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 22775-23216 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 2 2 775-2 32 16 bp Feature: gene Location: 24326-25018 bp Ori: KKC41232.1 Feature: domain Description: SpeE Location: 24425-24908 bp Feature: domain Description: SpeE Location: 2 442 5-2 4908 bp Feature: gene Location: 25699-26727 bp Ori: KKC41315.1 Feature: domain Description: MutY Location: 25711-26713 bp Feature: domain Description: MutY Location: 2 5711-2 6713 bp Feature: gene Location: 93716-94744 bp Ori: KKC41323.1 Feature: domain Description: MutY Location: 93728-94730 bp Feature: domain Description: MutY Location: 9372 8-94730 bp Feature: gene Location: 95425-96117 bp Ori: KKC41292.1 Feature: domain Description: SpeE Location: 95524-96007 bp Feature: domain Description: SpeE Location: 9552 4-96007 bp Feature: gene Location: 96370-98046 bp Ori: KKC41324.1 Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 96748-97189 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 96748-97189 bp Feature: gene Location: 98880-100013 bp Ori: KKC41293.1 Feature: domain Description: YhdJ Location: 98943-99786 bp Feature: domain Description: YhdJ Location: 98943-99786 bp Feature: gene Location: 100132-100728 bp Ori: KKC41325.1 Feature: domain Description: RNase_HII_bacteria_HII_like Location: 100162-100690 bp Feature: domain Description: RNase_HII_bacteria_HII_like Location: 100162 -100690 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RNase_HII_bacteria_HII_like (cd07182), YhdJ (COG0863), RVT-UG12, SpeE (COG0421), MutY (COG1194)