myRT

myRT report for GCA_000972025.1_ASM97202v1

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Seq: LASL01000004.1 Vibrio parahaemolyticus strain 09-4681 contig4, whole genome shotgun sequence (71243 bp)
Overview 1 RT 1: 47382-57165 bp Neighborhood of RT #1 [47382, 57188] HsdM RMtype1_S_LdeBORF1052P-TRD2-CR2 RMtype1_S_LdeBORF1052P-TRD2-CR2 RVT-UG5 COG0610 DUF45 Feature: gene Location: 47382-48926 bp Ori: KKC91269.1 Feature: domain Description: HsdM Location: 47418-48918 bp Feature: domain Description: HsdM Location: 4741 8-4891 8 bp Feature: gene Location: 48916-50154 bp Ori: KKC91270.1 Feature: domain Description: RMtype1_S_LdeBORF1052P-TRD2-CR2 Location: 48934-49510 bp Feature: domain Description: RMtype1 _S_LdeBORF1 052P-TRD2-CR2 Location: 48934-4951 0 bp Feature: domain Description: RMtype1_S_LdeBORF1052P-TRD2-CR2 Location: 49846-50128 bp Feature: domain Description: RMtype1 _S_LdeBORF1 052P-TRD2-CR2 Location: 49846-501 28 bp Feature: gene Location: 50167-53109 bp Ori: KKC91271.1 Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 50656-51112 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 50656-51 1 1 2 bp Feature: gene Location: 53152-56433 bp Ori: KKC91272.1 Feature: domain Description: COG0610 Location: 53179-56272 bp Feature: domain Description: COG061 0 Location: 531 79-56272 bp Feature: gene Location: 56439-57188 bp Ori: KKC91273.1 Feature: domain Description: DUF45 Location: 56547-57165 bp Feature: domain Description: DUF45 Location: 56547-571 65 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HsdM (COG0286), RMtype1_S_LdeBORF1052P-TRD2-CR2 (cd17278), RVT-UG5, COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), DUF45 (pfam01863)