myRT

myRT report for GCA_000972275.1_ASM97227v1

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Seq: LAUL01000001.1 Vibrio sp. ECSMB14105 contig1, whole genome shotgun sequence (546581 bp)
Overview 1 RT 1: 357884-366030 bp Neighborhood of RT #1 [357884, 366030] pheT RVT-UG3 RVT-UG8 Feature: gene Location: 357884-360289 bp Feature: domain Description: pheT Location: 357887-360287 bp Feature: domain Description: pheT Location: 357887-360287 bp Feature: gene Location: 360408-360662 bp Feature: gene Location: 360863-362212 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 361319-361796 bp Feature: RT Description: RVT-UG3 Note: UG3 RT Location: 361 31 9-361 796 bp Feature: gene Location: 362205-364235 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 362820-363267 bp Feature: RT Description: RVT-UG8 Note: UG8 RT Location: 362820-363267 bp Feature: gene Location: 364665-364877 bp Feature: gene Location: 365101-366030 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT pheT (PRK09616), RVT-UG3, RVT-UG8

Seq: LAUL01000031.1 Vibrio sp. ECSMB14105 contig31, whole genome shotgun sequence (21419 bp)
Overview 1 RT 1: 18540-21383 bp Neighborhood of RT #1 [18540, 21383] SatD SatD RVT_N RVT-GII InsE Feature: gene Location: 18540-19190 bp Feature: domain Description: SatD Location: 18564-18768 bp Feature: domain Description: SatD Location: 18564-18768 bp Feature: domain Description: SatD Location: 19035-19128 bp Feature: domain Description: SatD Location: 19035-1912 8 bp Feature: gene Location: 19514-19762 bp Feature: gene Location: 20055-20906 bp Feature: domain Description: RVT_N Location: 20109-20352 bp Feature: domain Description: RVT_N Location: 2 0109-2 0352 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20397-20874 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 0397-2 0874 bp Feature: gene Location: 20935-21219 bp Feature: domain Description: InsE Location: 20947-21211 bp Feature: domain Description: InsE Location: 2 0947-2 12 11 bp Feature: gene Location: 21234-21383 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT SatD (pfam16264), RVT_N (pfam13655), RVT-GII, InsE (COG2963)

Seq: LAUL01000004.1 Vibrio sp. ECSMB14105 contig4, whole genome shotgun sequence (840160 bp)
Overview 1 RT 1: 835196-840157 bp Neighborhood of RT #1 [835196, 840157] COG3791 Lpd RVT_N RVT-GII GIIM Feature: gene Location: 835196-835615 bp Feature: domain Description: COG3791 Location: 835202-835568 bp Feature: domain Description: COG3 791 Location: 83 5202-83 5568 bp Feature: gene Location: 835922-837406 bp Feature: domain Description: Lpd Location: 835961-837329 bp Feature: domain Description: Lpd Location: 83 5961-83 73 29 bp Feature: gene Location: 838529-840001 bp Feature: domain Description: RVT_N Location: 838577-838820 bp Feature: domain Description: RVT_N Location: 83 8577-83 8820 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 838865-839492 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 83 8865-83 9492 bp Feature: domain Description: GIIM Note: maturase Location: 839552-839777 bp Feature: domain Description: GIIM Note: maturase Location: 83 9552-83 9777 bp Feature: gene Location: 840020-840157 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3791 (Uncharacterized conserved protein ), Lpd (COG1249), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)