myRT

myRT report for GCA_000973845.1_SALF-276-1.id8_v1.0

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Seq: LAPM01000036.1 (9456 bp)
Overview 1 RT 1: 971-5406 bp Neighborhood of RT #1 [971, 5411] RVT-GII Intron_maturas2 HNHc PRK13732 DUF905 Feature: gene Location: 971-1162 bp Feature: gene Location: 1353-1730 bp Feature: gene Location: 2584-4485 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2851-3682 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2851 -3682 bp Feature: domain Description: Intron_maturas2 Location: 3796-4054 bp Feature: domain Description: Intron_maturas2 Location: 3796-4054 bp Feature: domain Description: HNHc Note: nucleases Location: 4228-4390 bp Feature: domain Description: HNHc Note: nucleases Location: 4228-4390 bp Feature: gene Location: 4635-5120 bp Feature: domain Description: PRK13732 Location: 4638-5118 bp Feature: domain Description: PRK1 3732 Location: 4638-51 1 8 bp Feature: gene Location: 5178-5411 bp Feature: domain Description: DUF905 Location: 5208-5406 bp Feature: domain Description: DUF905 Location: 5208-5406 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507), PRK13732 (single-stranded DNA-binding protein; Provisional), DUF905 (pfam06006)

Seq: LAPM01000004.1 (86865 bp)
Overview 1 RT 1: 43642-49420 bp Neighborhood of RT #1 [43642, 49491] PRK10216 PRK10473 RVT-Retrons INT_P4_C Feature: gene Location: 43642-44601 bp Feature: domain Description: PRK10216 Location: 43645-44596 bp Feature: domain Description: PRK102 16 Location: 43645-44596 bp Feature: gene Location: 44570-45757 bp Feature: domain Description: PRK10473 Location: 44573-45749 bp Feature: domain Description: PRK10473 Location: 44573-45749 bp Feature: gene Location: 46559-47494 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 46670-47255 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 46670-472 55 bp Feature: gene Location: 47494-48456 bp Feature: gene Location: 48781-49491 bp Feature: domain Description: INT_P4_C Location: 48889-49420 bp Feature: domain Description: INT_P4_C Location: 48889-4942 0 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK10216 (HTH-type transcriptional regulator YidZ), PRK10473 (MdtL family multidrug efflux MFS transporter), RVT-Retrons, INT_P4_C (cd00801)