myRT

myRT report for GCA_000974245.1_ASM97424v1

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Seq: LAYT01000102.1 Arthrospira sp. TJSD091 Contig102, whole genome shotgun sequence (3252 bp)
Overview 1 RT 1: 1-3132 bp Neighborhood of RT #1 [1, 3251] RVT-GII GIIM HNHc RVT-GII DUF4277 DDE_Tnp_1 Feature: gene Location: 1-222 bp Feature: gene Location: 321-518 bp Feature: gene Location: 541-1794 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 589-1036 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 589-1 036 bp Feature: domain Description: GIIM Note: maturase Location: 1141-1342 bp Feature: domain Description: GIIM Note: maturase Location: 1 1 41 -1 342 bp Feature: domain Description: HNHc Note: nucleases Location: 1585-1732 bp Feature: domain Description: HNHc Note: nucleases Location: 1 585-1 732 bp Feature: gene Location: 1842-2132 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1950-2115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 950-21 1 5 bp Feature: gene Location: 2358-3251 bp Feature: domain Description: DUF4277 Location: 2364-2685 bp Feature: domain Description: DUF4277 Location: 2364-2685 bp Feature: domain Description: DDE_Tnp_1 Location: 2730-3132 bp Feature: domain Description: DDE_Tnp_1 Location: 2730-31 32 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507), DUF4277 (pfam14104), DDE_Tnp_1 (pfam01609)

Seq: LAYT01000108.1 Arthrospira sp. TJSD091 Contig108, whole genome shotgun sequence (16005 bp)
Overview 1 RT 1: 10468-13959 bp Neighborhood of RT #1 [10468, 13959] DDE_3 ParE_toxin RVT-GII GIIM HNHc Feature: gene Location: 10468-11034 bp Feature: domain Description: DDE_3 Location: 10630-11026 bp Feature: domain Description: DDE_3 Location: 10630-1102 6 bp Feature: gene Location: 11209-11511 bp Feature: domain Description: ParE_toxin Location: 11224-11485 bp Feature: domain Description: ParE_toxin Location: 112 2 4-11485 bp Feature: gene Location: 12042-13166 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12045-12408 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 045-12 408 bp Feature: domain Description: GIIM Note: maturase Location: 12513-12714 bp Feature: domain Description: GIIM Note: maturase Location: 12 513-12 714 bp Feature: domain Description: HNHc Note: nucleases Location: 12948-13113 bp Feature: domain Description: HNHc Note: nucleases Location: 12 948-13113 bp Feature: gene Location: 13224-13481 bp Feature: gene Location: 13549-13959 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_3 (pfam13358), ParE_toxin (pfam05016), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: LAYT01000012.1 Arthrospira sp. TJSD091 Contig12, whole genome shotgun sequence (20996 bp)
Overview 1 RT 1: 9411-12770 bp Neighborhood of RT #1 [9411, 13222] PRK07459 RVT_N RVT-GII GIIM NAD_bind_1_Glu_DH Lys9 Feature: gene Location: 9411-9572 bp Feature: domain Description: PRK07459 Location: 9414-9549 bp Feature: domain Description: PRK07459 Location: 9414-9549 bp Feature: gene Location: 9757-9900 bp Feature: gene Location: 9926-11434 bp Feature: domain Description: RVT_N Location: 9956-10202 bp Feature: domain Description: RVT_N Location: 9956-10202 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10244-10904 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 10244-10904 bp Feature: domain Description: GIIM Note: maturase Location: 11006-11243 bp Feature: domain Description: GIIM Note: maturase Location: 11006-11243 bp Feature: gene Location: 11515-11730 bp Feature: gene Location: 12203-13222 bp Feature: domain Description: NAD_bind_1_Glu_DH Location: 12260-12455 bp Feature: domain Description: NAD_bind_1_Glu_DH Location: 12260-12455 bp Feature: domain Description: Lys9 Location: 12488-12770 bp Feature: domain Description: Lys9 Location: 12488-12770 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK07459 (single-stranded DNA-binding protein; Provisional), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), NAD_bind_1_Glu_DH (cd01076), Lys9 (COG1748)

Seq: LAYT01000120.1 Arthrospira sp. TJSD091 Contig120, whole genome shotgun sequence (3018 bp)
Overview 1 RT 1: 3-2415 bp Neighborhood of RT #1 [3, 2432] DDE_Tnp_1 RVT-GII GIIM McrA RVT_N RVT-GII Feature: gene Location: 3-461 bp Feature: domain Description: DDE_Tnp_1 Location: 150-282 bp Feature: domain Description: DDE_Tnp_1 Location: 150-282 bp Feature: gene Location: 758-2032 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 764-1187 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 764 -1187 bp Feature: domain Description: GIIM Note: maturase Location: 1295-1502 bp Feature: domain Description: GIIM Note: maturase Location: 1295-1502 bp Feature: domain Description: McrA Location: 1631-1922 bp Feature: domain Description: McrA Location: 1631-1922 bp Feature: gene Location: 2022-2432 bp Feature: domain Description: RVT_N Location: 2061-2142 bp Feature: domain Description: RVT_N Location: 2061-214 2 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2187-2415 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2187-24 15 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388), McrA (COG4058), RVT_N (pfam13655)

Seq: LAYT01000123.1 Arthrospira sp. TJSD091 Contig123, whole genome shotgun sequence (3054 bp)
Overview 1 RT 1: 3-2451 bp Neighborhood of RT #1 [3, 2468] DDE_Tnp_1 RVT-GII GIIM McrA RVT_N RVT-GII Feature: gene Location: 3-497 bp Feature: domain Description: DDE_Tnp_1 Location: 186-318 bp Feature: domain Description: DDE_Tnp_1 Location: 186-318 bp Feature: gene Location: 794-2068 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 800-1223 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 800-1223 bp Feature: domain Description: GIIM Note: maturase Location: 1331-1538 bp Feature: domain Description: GIIM Note: maturase Location: 1331-15 38 bp Feature: domain Description: McrA Location: 1667-1958 bp Feature: domain Description: McrA Location: 1667-195 8 bp Feature: gene Location: 2058-2468 bp Feature: domain Description: RVT_N Location: 2097-2178 bp Feature: domain Description: RVT_N Location: 2097-2178 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2223-2451 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2223-245 1 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_Tnp_1 (pfam01609), RVT-GII, GIIM (pfam08388), McrA (COG4058), RVT_N (pfam13655)

Seq: LAYT01000132.1 Arthrospira sp. TJSD091 Contig132, whole genome shotgun sequence (12377 bp)
Overview 1 RT 1: 10395-12326 bp Neighborhood of RT #1 [10395, 12376] DUF2281 RVT-GII group_II_RT_mat HNHc Feature: gene Location: 10395-10637 bp Feature: gene Location: 10829-11107 bp Feature: domain Description: DUF2281 Location: 10859-10985 bp Feature: domain Description: DUF2281 Location: 10859-10985 bp Feature: gene Location: 11318-12376 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11324-11588 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11324-11588 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 11651-11912 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 116 51-11912 bp Feature: domain Description: HNHc Note: nucleases Location: 12167-12326 bp Feature: domain Description: HNHc Note: nucleases Location: 1216 7-12326 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2281 (pfam10047), RVT-GII, group_II_RT_mat (TIGR04416), HNHc (smart00507)

Seq: LAYT01000136.1 Arthrospira sp. TJSD091 Contig136, whole genome shotgun sequence (30463 bp)
Overview 1 RT 1: 3-3554 bp Neighborhood of RT #1 [3, 3565] RVT_N RVT-GII GIIM HNHc Usp Fdx Feature: gene Location: 3-206 bp Feature: domain Description: RVT_N Location: 51-201 bp Feature: domain Description: RVT_N Location: 51-201 bp Feature: gene Location: 1060-1224 bp Feature: gene Location: 1221-2411 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1227-1653 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1227 -1653 bp Feature: domain Description: GIIM Note: maturase Location: 1758-1965 bp Feature: domain Description: GIIM Note: maturase Location: 17 58-1965 bp Feature: domain Description: HNHc Note: nucleases Location: 2202-2343 bp Feature: domain Description: HNHc Note: nucleases Location: 2202-2343 bp Feature: gene Location: 2714-3190 bp Feature: domain Description: Usp Location: 2723-3170 bp Feature: domain Description: Usp Location: 27 23-317 0 bp Feature: gene Location: 3266-3565 bp Feature: domain Description: Fdx Location: 3275-3554 bp Feature: domain Description: Fdx Location: 327 5-3554 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), Usp (pfam00582), Fdx (COG0633)

Seq: LAYT01000153.1 Arthrospira sp. TJSD091 Contig153, whole genome shotgun sequence (31425 bp)
Overview 1 RT 1: 12052-17039 bp Neighborhood of RT #1 [12052, 17068] MFS_MefA_like RVT_N RVT-GII GIIM HNHc secG COG5549 Feature: gene Location: 12052-13635 bp Feature: domain Description: MFS_MefA_like Location: 12397-13612 bp Feature: domain Description: MFS_MefA_like Location: 12397-13612 bp Feature: gene Location: 13685-13960 bp Feature: gene Location: 14243-16006 bp Feature: domain Description: RVT_N Location: 14309-14552 bp Feature: domain Description: RVT_N Location: 14309-14552 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14597-15266 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 14597-15266 bp Feature: domain Description: GIIM Note: maturase Location: 15371-15578 bp Feature: domain Description: GIIM Note: maturase Location: 15371-15578 bp Feature: domain Description: HNHc Note: nucleases Location: 15815-15974 bp Feature: domain Description: HNHc Note: nucleases Location: 158 15-15974 bp Feature: gene Location: 16131-16361 bp Feature: domain Description: secG Location: 16146-16347 bp Feature: domain Description: secG Location: 16146-16347 bp Feature: gene Location: 16397-17068 bp Feature: domain Description: COG5549 Location: 16469-17039 bp Feature: domain Description: COG5549 Location: 16469-17039 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT MFS_MefA_like (cd06173), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), secG (TIGR00810), COG5549 (Predicted Zn-dependent protease )

Seq: LAYT01000158.1 Arthrospira sp. TJSD091 Contig158, whole genome shotgun sequence (40650 bp)
Overview 1 RT 1: 2-1440 bp Neighborhood of RT #1 [2, 1440] group_II_RT_mat RVT_N RVT-GII RVT_N Feature: gene Location: 2-226 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 5-227 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 5-227 bp Feature: gene Location: 323-1042 bp Feature: domain Description: RVT_N Location: 362-443 bp Feature: domain Description: RVT_N Location: 362-443 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 488-1037 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 488-1037 bp Feature: gene Location: 1064-1288 bp Feature: domain Description: RVT_N Location: 1133-1283 bp Feature: domain Description: RVT_N Location: 1133-1283 bp Feature: gene Location: 1291-1440 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT group_II_RT_mat (TIGR04416), RVT_N (pfam13655), RVT-GII

Seq: LAYT01000161.1 Arthrospira sp. TJSD091 Contig161, whole genome shotgun sequence (102737 bp)
Overview 1 RT 1: 65648-69548 bp Neighborhood of RT #1 [65648, 69574] COG4828 RVT_N RVT-GII GIIM McrA Feature: gene Location: 65648-66019 bp Feature: domain Description: COG4828 Location: 65687-65987 bp Feature: domain Description: COG4828 Location: 65687-65987 bp Feature: gene Location: 66029-66166 bp Feature: gene Location: 66848-68176 bp Feature: domain Description: RVT_N Location: 66914-67157 bp Feature: domain Description: RVT_N Location: 66914-67157 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67202-67871 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 67202-67871 bp Feature: domain Description: GIIM Note: maturase Location: 68006-68168 bp Feature: domain Description: GIIM Note: maturase Location: 68006-68168 bp Feature: gene Location: 68285-68608 bp Feature: gene Location: 69044-69574 bp Feature: domain Description: McrA Location: 69290-69548 bp Feature: domain Description: McrA Location: 69290-69548 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4828 (Uncharacterized membrane protein ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: LAYT01000175.1 Arthrospira sp. TJSD091 Contig175, whole genome shotgun sequence (1992 bp)
Overview 1 RT 1: 1-1939 bp Neighborhood of RT #1 [1, 1989] RVT-GII GIIM HNHc Feature: gene Location: 1-252 bp Feature: gene Location: 580-1989 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 586-1231 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 586-1231 bp Feature: domain Description: GIIM Note: maturase Location: 1336-1546 bp Feature: domain Description: GIIM Note: maturase Location: 1336-1546 bp Feature: domain Description: HNHc Note: nucleases Location: 1780-1939 bp Feature: domain Description: HNHc Note: nucleases Location: 1780-1939 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: LAYT01000181.1 Arthrospira sp. TJSD091 Contig181, whole genome shotgun sequence (38397 bp)
Overview 1 RT 1: 9816-15035 bp Neighborhood of RT #1 [9816, 15046] WcaA TPR TPR RVT_N RVT-GII GIIM argC Usp Usp Feature: gene Location: 9816-11009 bp Feature: domain Description: WcaA Location: 9819-10230 bp Feature: domain Description: WcaA Location: 9819-10230 bp Feature: domain Description: TPR Location: 10350-10617 bp Feature: domain Description: TPR Location: 10350-10617 bp Feature: domain Description: TPR Location: 10653-10932 bp Feature: domain Description: TPR Location: 10653-10932 bp Feature: gene Location: 11226-11399 bp Feature: gene Location: 11819-12991 bp Feature: domain Description: RVT_N Location: 11927-12041 bp Feature: domain Description: RVT_N Location: 11927-12 041 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12386-12599 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 12 386-12 599 bp Feature: domain Description: GIIM Note: maturase Location: 12686-12911 bp Feature: domain Description: GIIM Note: maturase Location: 12 686-12 911 bp Feature: gene Location: 13149-14147 bp Feature: domain Description: argC Location: 13152-14145 bp Feature: domain Description: argC Location: 13152-14145 bp Feature: gene Location: 14195-15046 bp Feature: domain Description: Usp Location: 14198-14591 bp Feature: domain Description: Usp Location: 14198-14591 bp Feature: domain Description: Usp Location: 14618-15035 bp Feature: domain Description: Usp Location: 14618-15035 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT WcaA (TIGR04017), TPR (smart00028), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), argC (TIGR01850), Usp (pfam00582)

Seq: LAYT01000185.1 Arthrospira sp. TJSD091 Contig185, whole genome shotgun sequence (46264 bp)
Overview 1 RT 1: 27555-33728 bp Neighborhood of RT #1 [27555, 33799] YjbI Pentapeptide RVT-CRISPR Cas1_I-II-III Cas1_I-II-III Cas1_I-II-III Cas2_I_II_III Feature: gene Location: 27555-28331 bp Feature: gene Location: 28392-29018 bp Feature: domain Description: YjbI Location: 28443-28716 bp Feature: domain Description: YjbI Location: 28443-28716 bp Feature: domain Description: Pentapeptide Location: 28806-28905 bp Feature: domain Description: Pentapeptide Location: 28806-28905 bp Feature: gene Location: 30403-32412 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 30631-31234 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 30631-31234 bp Feature: domain Description: Cas1_I-II-III Location: 31414-32371 bp Feature: domain Description: Cas1_I-II-III Location: 31414-32371 bp Feature: gene Location: 32592-33488 bp Feature: domain Description: Cas1_I-II-III Location: 32604-32964 bp Feature: domain Description: Cas1_I-II-III Location: 32604-32964 bp Feature: domain Description: Cas1_I-II-III Location: 33114-33450 bp Feature: domain Description: Cas1_I-II-III Location: 33114-33450 bp Feature: gene Location: 33485-33799 bp Feature: domain Description: Cas2_I_II_III Location: 33497-33728 bp Feature: domain Description: Cas2_I_II_III Location: 33497-33728 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YjbI (COG2346), Pentapeptide (pfam00805), RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442)

Seq: LAYT01000201.1 Arthrospira sp. TJSD091 Contig201, whole genome shotgun sequence (2771 bp)
Overview 1 RT 1: 1144-2768 bp Neighborhood of RT #1 [1144, 2768] RVT_N RVT-GII Feature: gene Location: 1144-1401 bp Feature: gene Location: 1684-2280 bp Feature: domain Description: RVT_N Location: 1753-1996 bp Feature: domain Description: RVT_N Location: 1753-1996 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2041-2254 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2041-2254 bp Feature: gene Location: 2418-2768 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: LAYT01000204.1 Arthrospira sp. TJSD091 Contig204, whole genome shotgun sequence (1563 bp)
Overview 1 RT 1: 125-1089 bp Neighborhood of RT #1 [125, 1097] RVT-GII GIIM Feature: gene Location: 125-352 bp Feature: gene Location: 372-1097 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 378-804 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 378-804 bp Feature: domain Description: GIIM Note: maturase Location: 909-1089 bp Feature: domain Description: GIIM Note: maturase Location: 909-1089 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: LAYT01000024.1 Arthrospira sp. TJSD091 Contig24, whole genome shotgun sequence (94630 bp)
Overview 1 RT 1: 50435-58318 bp Neighborhood of RT #1 [50435, 58332] InsQ RVT_N RVT-GII GIIM McrA rSAM_fuse_unch pbp2_mrdA Feature: gene Location: 50435-51550 bp Feature: domain Description: InsQ Location: 50438-51527 bp Feature: domain Description: InsQ Location: 50438-51527 bp Feature: gene Location: 52029-52190 bp Feature: gene Location: 52522-54297 bp Feature: domain Description: RVT_N Location: 52588-52831 bp Feature: domain Description: RVT_N Location: 52588-52831 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52876-53545 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52876-53545 bp Feature: domain Description: GIIM Note: maturase Location: 53644-53854 bp Feature: domain Description: GIIM Note: maturase Location: 53644-53854 bp Feature: domain Description: McrA Location: 53989-54271 bp Feature: domain Description: McrA Location: 53989-54271 bp Feature: gene Location: 54310-56037 bp Feature: domain Description: rSAM_fuse_unch Location: 54475-56002 bp Feature: domain Description: rSAM_fuse_unch Location: 54475-56002 bp Feature: gene Location: 56512-58332 bp Feature: domain Description: pbp2_mrdA Location: 56635-58318 bp Feature: domain Description: pbp2_mrdA Location: 56635-58318 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058), rSAM_fuse_unch (TIGR03960), pbp2_mrdA (TIGR03423)

Seq: LAYT01000245.1 Arthrospira sp. TJSD091 Contig245, whole genome shotgun sequence (4062 bp)
Overview 1 RT 1: 2-3494 bp Neighborhood of RT #1 [2, 3494] DDE_3 RVT_N RVT-GII RVT-GII GIIM Feature: gene Location: 2-406 bp Feature: domain Description: DDE_3 Location: 11-368 bp Feature: domain Description: DDE_3 Location: 11-368 bp Feature: gene Location: 769-960 bp Feature: gene Location: 1419-2018 bp Feature: domain Description: RVT_N Location: 1485-1728 bp Feature: domain Description: RVT_N Location: 1485-17 28 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1773-2001 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17 73-2001 bp Feature: gene Location: 2089-2823 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2095-2440 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2095-2440 bp Feature: domain Description: GIIM Note: maturase Location: 2575-2797 bp Feature: domain Description: GIIM Note: maturase Location: 2575-2797 bp Feature: gene Location: 2847-3014 bp Feature: gene Location: 3066-3494 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_3 (pfam13358), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: LAYT01000253.1 Arthrospira sp. TJSD091 Contig253, whole genome shotgun sequence (10867 bp)
Overview 1 RT 1: 4977-10804 bp Neighborhood of RT #1 [4977, 10866] Crp PRK12309 RVT-GII group_II_RT_mat RVT_N RVT-GII COG3415 Feature: gene Location: 4977-5345 bp Feature: domain Description: Crp Location: 5013-5331 bp Feature: domain Description: Crp Location: 5013-5331 bp Feature: gene Location: 5586-6572 bp Feature: domain Description: PRK12309 Location: 5589-6567 bp Feature: domain Description: PRK12309 Location: 5589-6567 bp Feature: gene Location: 6781-7803 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6787-7135 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6787-7135 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 7198-7459 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 7198-7459 bp Feature: gene Location: 7949-8146 bp Feature: gene Location: 8737-9321 bp Feature: domain Description: RVT_N Location: 8779-9019 bp Feature: domain Description: RVT_N Location: 8779-9019 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9064-9274 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9064-9274 bp Feature: gene Location: 9635-9829 bp Feature: gene Location: 10456-10866 bp Feature: domain Description: COG3415 Location: 10465-10804 bp Feature: domain Description: COG3415 Location: 10465-10804 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Crp (pfam00325), PRK12309 (transaldolase), RVT-GII, group_II_RT_mat (TIGR04416), RVT_N (pfam13655), COG3415 (Transposase )

Seq: LAYT01000258.1 Arthrospira sp. TJSD091 Contig258, whole genome shotgun sequence (38351 bp)
Overview 1 RT 1: 33211-38145 bp Neighborhood of RT #1 [33211, 38145] COG3744 NagA RVT_N RVT-GII GIIM DUF2839 Feature: gene Location: 33211-33612 bp Feature: domain Description: COG3744 Location: 33220-33589 bp Feature: domain Description: COG3744 Location: 33220-33589 bp Feature: gene Location: 33668-34870 bp Feature: domain Description: NagA Location: 33749-34748 bp Feature: domain Description: NagA Location: 33749-34748 bp Feature: gene Location: 35585-37090 bp Feature: domain Description: RVT_N Location: 35630-35876 bp Feature: domain Description: RVT_N Location: 35630-35876 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35960-36584 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 35960-36584 bp Feature: domain Description: GIIM Note: maturase Location: 36695-36917 bp Feature: domain Description: GIIM Note: maturase Location: 36695-36917 bp Feature: gene Location: 37180-37359 bp Feature: domain Description: DUF2839 Location: 37207-37348 bp Feature: domain Description: DUF2839 Location: 37207-37348 bp Feature: gene Location: 37948-38145 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3744 (PIN domain nuclease, a component of toxin-antitoxin system (PIN domain) ), NagA (COG1820), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), DUF2839 (pfam10999)

Seq: LAYT01000259.1 Arthrospira sp. TJSD091 Contig259, whole genome shotgun sequence (35470 bp)
Overview 1 RT 1: 1-4495 bp Neighborhood of RT #1 [1, 4500] GIIM HNHc DUF1815 RVT-GII KOG4178 Feature: gene Location: 1-780 bp Feature: domain Description: GIIM Note: maturase Location: 127-355 bp Feature: domain Description: GIIM Note: maturase Location: 127-355 bp Feature: domain Description: HNHc Note: nucleases Location: 571-718 bp Feature: domain Description: HNHc Note: nucleases Location: 571-718 bp Feature: gene Location: 889-1233 bp Feature: domain Description: DUF1815 Location: 895-1186 bp Feature: domain Description: DUF1815 Location: 895-1186 bp Feature: gene Location: 2242-2634 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2467-2629 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2467-2629 bp Feature: gene Location: 3154-3366 bp Feature: gene Location: 3616-4500 bp Feature: domain Description: KOG4178 Location: 3646-4495 bp Feature: domain Description: KOG4178 Location: 3646-4495 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), HNHc (smart00507), DUF1815 (pfam08844), RVT-GII, KOG4178 (KOG4178, Soluble epoxide hydrolase )

Seq: LAYT01000265.1 Arthrospira sp. TJSD091 Contig265, whole genome shotgun sequence (74134 bp)
Overview 1 RT 1: 69920-73748 bp Neighborhood of RT #1 [69920, 73774] RVT_N RVT-GII group_II_RT_mat McrA Feature: gene Location: 69920-70198 bp Feature: gene Location: 70559-70861 bp Feature: gene Location: 71048-72376 bp Feature: domain Description: RVT_N Location: 71114-71357 bp Feature: domain Description: RVT_N Location: 71114-71357 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71402-72071 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 71402-72071 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 72134-72371 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 721 34-72371 bp Feature: gene Location: 72485-72808 bp Feature: gene Location: 73253-73774 bp Feature: domain Description: McrA Location: 73484-73748 bp Feature: domain Description: McrA Location: 73484-73748 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, group_II_RT_mat (TIGR04416), McrA (COG4058)

Seq: LAYT01000266.1 Arthrospira sp. TJSD091 Contig266, whole genome shotgun sequence (114307 bp)
Overview 1 RT 1: 25017-27513 bp Neighborhood of RT #1 [25017, 27521] RVT_N RVT-GII COG3415 DDE_3 Feature: gene Location: 25017-25214 bp Feature: gene Location: 25215-25457 bp Feature: gene Location: 25831-26658 bp Feature: domain Description: RVT_N Location: 25870-26113 bp Feature: domain Description: RVT_N Location: 25870-26113 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26158-26638 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 26158-26638 bp Feature: gene Location: 26700-27065 bp Feature: domain Description: COG3415 Location: 26709-27045 bp Feature: domain Description: COG3415 Location: 26709-27045 bp Feature: gene Location: 27081-27521 bp Feature: domain Description: DDE_3 Location: 27117-27513 bp Feature: domain Description: DDE_3 Location: 27117-27513 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, COG3415 (Transposase ), DDE_3 (pfam13358)

Seq: LAYT01000282.1 Arthrospira sp. TJSD091 Contig282, whole genome shotgun sequence (4200 bp)
Overview 1 RT 1: 518-4197 bp Neighborhood of RT #1 [518, 4197] DDE_3 RVT_N RVT-GII GIIM Feature: gene Location: 518-790 bp Feature: domain Description: DDE_3 Location: 524-752 bp Feature: domain Description: DDE_3 Location: 524-752 bp Feature: gene Location: 1112-1270 bp Feature: gene Location: 1286-2776 bp Feature: domain Description: RVT_N Location: 1340-1583 bp Feature: domain Description: RVT_N Location: 1340-1583 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1634-2312 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1634-23 12 bp Feature: domain Description: GIIM Note: maturase Location: 2366-2600 bp Feature: domain Description: GIIM Note: maturase Location: 23 66-2600 bp Feature: gene Location: 3023-3241 bp Feature: gene Location: 4024-4197 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DDE_3 (pfam13358), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: LAYT01000288.1 Arthrospira sp. TJSD091 Contig288, whole genome shotgun sequence (5589 bp)
Overview 1 RT 1: 479-5434 bp Neighborhood of RT #1 [479, 5544] accC RVT_N RVT-GII McrA Feature: gene Location: 479-748 bp Feature: gene Location: 1122-2483 bp Feature: domain Description: accC Location: 1131-2460 bp Feature: domain Description: accC Location: 1131-24 60 bp Feature: gene Location: 3736-4710 bp Feature: domain Description: RVT_N Location: 3784-4030 bp Feature: domain Description: RVT_N Location: 3784-4030 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4072-4684 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4072-4684 bp Feature: gene Location: 5017-5544 bp Feature: domain Description: McrA Location: 5164-5434 bp Feature: domain Description: McrA Location: 5164-5434 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT accC (TIGR00514), RVT_N (pfam13655), RVT-GII, McrA (COG4058)

Seq: LAYT01000326.1 Arthrospira sp. TJSD091 Contig326, whole genome shotgun sequence (5883 bp)
Overview 1 RT 1: 3175-5638 bp Neighborhood of RT #1 [3175, 5775] DUF2973 DUF2605 RVT_N RVT-GII GIIM McrA Feature: gene Location: 3175-3486 bp Feature: domain Description: DUF2973 Location: 3178-3397 bp Feature: domain Description: DUF2973 Location: 3178-3397 bp Feature: gene Location: 3681-4022 bp Feature: domain Description: DUF2605 Location: 3702-3981 bp Feature: domain Description: DUF2605 Location: 3702-3981 bp Feature: gene Location: 4072-5775 bp Feature: domain Description: RVT_N Location: 4111-4192 bp Feature: domain Description: RVT_N Location: 4111-4192 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4237-4906 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4237-4906 bp Feature: domain Description: GIIM Note: maturase Location: 5017-5224 bp Feature: domain Description: GIIM Note: maturase Location: 5017-5224 bp Feature: domain Description: McrA Location: 5389-5638 bp Feature: domain Description: McrA Location: 5389-5638 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF2973 (pfam11189), DUF2605 (pfam10792), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: LAYT01000328.1 Arthrospira sp. TJSD091 Contig328, whole genome shotgun sequence (7580 bp)
Overview 1 RT 1: 1099-7539 bp Neighborhood of RT #1 [1099, 7577] rpsU BaeS RVT-GII GIIM McrA RVT_N RVT-GII RVT_N RVT-GII DDE_3 Feature: gene Location: 1099-1296 bp Feature: domain Description: rpsU Location: 1102-1279 bp Feature: domain Description: rpsU Location: 1102-1279 bp Feature: gene Location: 1385-2578 bp Feature: domain Description: BaeS Location: 1463-2567 bp Feature: domain Description: BaeS Location: 1463-2567 bp Feature: gene Location: 2591-3694 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2594-2942 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2594-2942 bp Feature: domain Description: GIIM Note: maturase Location: 3041-3263 bp Feature: domain Description: GIIM Note: maturase Location: 3041-326 3 bp Feature: domain Description: McrA Location: 3377-3668 bp Feature: domain Description: McrA Location: 3377-3668 bp Feature: gene Location: 3768-4370 bp Feature: domain Description: RVT_N Location: 3837-4080 bp Feature: domain Description: RVT_N Location: 3837-4080 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4125-4353 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4125-4353 bp Feature: gene Location: 5142-5372 bp Feature: gene Location: 5528-5773 bp Feature: gene Location: 6532-6945 bp Feature: domain Description: RVT_N Location: 6601-6844 bp Feature: domain Description: RVT_N Location: 6601-6844 bp Feature: gene Location: 6836-7129 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6908-7103 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6908-7103 bp Feature: gene Location: 7167-7577 bp Feature: domain Description: DDE_3 Location: 7170-7539 bp Feature: domain Description: DDE_3 Location: 7170-7539 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpsU (PRK00270), BaeS (COG0642), RVT-GII, GIIM (pfam08388), McrA (COG4058), RVT_N (pfam13655), DDE_3 (pfam13358)

Seq: LAYT01000333.1 Arthrospira sp. TJSD091 Contig333, whole genome shotgun sequence (29363 bp)
Overview 1 RT 1: 26036-29238 bp Neighborhood of RT #1 [26036, 29342] COG3415 DDE_3 RVT_N RVT-GII HTH_23 HTH_33 DDE_3 Feature: gene Location: 26036-26404 bp Feature: domain Description: COG3415 Location: 26042-26387 bp Feature: domain Description: COG3415 Location: 26042-26387 bp Feature: gene Location: 26458-26733 bp Feature: domain Description: DDE_3 Location: 26476-26731 bp Feature: domain Description: DDE_3 Location: 26476-26731 bp Feature: gene Location: 26954-28096 bp Feature: domain Description: RVT_N Location: 26993-27236 bp Feature: domain Description: RVT_N Location: 26993-27 236 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27281-27953 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 27 281-27 953 bp Feature: gene Location: 28149-29342 bp Feature: domain Description: HTH_23 Location: 28365-28494 bp Feature: domain Description: HTH_23 Location: 28365-28494 bp Feature: domain Description: HTH_33 Location: 28590-28764 bp Feature: domain Description: HTH_33 Location: 28590-28764 bp Feature: domain Description: DDE_3 Location: 28818-29238 bp Feature: domain Description: DDE_3 Location: 28818-29238 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3415 (Transposase ), DDE_3 (pfam13358), RVT_N (pfam13655), RVT-GII, HTH_23 (pfam13384), HTH_33 (pfam13592)

Seq: LAYT01000340.1 Arthrospira sp. TJSD091 Contig340, whole genome shotgun sequence (36255 bp)
Overview 1 RT 1: 1-3773 bp Neighborhood of RT #1 [1, 3793] RVT-GII group_II_RT_mat HNH Cas_csx3 TIGR03985 Feature: gene Location: 1-1203 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-415 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7-415 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 478-739 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 478-739 bp Feature: domain Description: HNH Note: nucleases Location: 1021-1156 bp Feature: domain Description: HNH Note: nucleases Location: 1021-1156 bp Feature: gene Location: 1318-2247 bp Feature: domain Description: Cas_csx3 Location: 1417-1639 bp Feature: domain Description: Cas_csx3 Location: 1417-1639 bp Feature: gene Location: 2303-3793 bp Feature: domain Description: TIGR03985 Location: 3029-3773 bp Feature: domain Description: TIGR03985 Location: 3029-3773 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, group_II_RT_mat (TIGR04416), HNH (pfam01844), Cas_csx3 (pfam09620), TIGR03985 (CRISPR-associated protein, TIGR03985 family)

Seq: LAYT01000342.1 Arthrospira sp. TJSD091 Contig342, whole genome shotgun sequence (910 bp)
Overview 1 RT 1: 3-909 bp Neighborhood of RT #1 [3, 909] RVT_N RVT-GII Feature: gene Location: 3-491 bp Feature: domain Description: RVT_N Location: 105-186 bp Feature: domain Description: RVT_N Location: 105-186 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 231-423 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 231-423 bp Feature: gene Location: 667-909 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII

Seq: LAYT01000355.1 Arthrospira sp. TJSD091 Contig355, whole genome shotgun sequence (7145 bp)
Overview 1 RT 1: 37-2318 bp Neighborhood of RT #1 [37, 2320] RVT-GII RVT_N RVT-GII PRK13474 Feature: gene Location: 37-384 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43-358 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 43-358 bp Feature: gene Location: 374-784 bp Feature: domain Description: RVT_N Location: 413-494 bp Feature: domain Description: RVT_N Location: 413-494 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 539-767 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 539-767 bp Feature: gene Location: 914-1162 bp Feature: gene Location: 1781-2320 bp Feature: domain Description: PRK13474 Location: 1790-2318 bp Feature: domain Description: PRK13474 Location: 1790-2318 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, RVT_N (pfam13655), PRK13474 (cytochrome b6-f complex iron-sulfur subunit; Provisional)

Seq: LAYT01000004.1 Arthrospira sp. TJSD091 Contig4, whole genome shotgun sequence (8279 bp)
Overview 1 RT 1: 2-1857 bp Neighborhood of RT #1 [2, 1857] RVT-GII group_II_RT_mat HNHc InsQ InsQ Feature: gene Location: 2-961 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11-173 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11-173 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 236-497 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 236-497 bp Feature: domain Description: HNHc Note: nucleases Location: 752-911 bp Feature: domain Description: HNHc Note: nucleases Location: 752-911 bp Feature: gene Location: 985-1683 bp Feature: domain Description: InsQ Location: 1042-1348 bp Feature: domain Description: InsQ Location: 1042-1348 bp Feature: domain Description: InsQ Location: 1369-1603 bp Feature: domain Description: InsQ Location: 1369-1603 bp Feature: gene Location: 1693-1857 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, group_II_RT_mat (TIGR04416), HNHc (smart00507), InsQ (COG0675)

Seq: LAYT01000059.1 Arthrospira sp. TJSD091 Contig59, whole genome shotgun sequence (164291 bp)
Overview 1 RT 1: 70204-74481 bp Neighborhood of RT #1 [70204, 74594] GIIM HNHc RVT-GII RVT_N RVT-GII RVT_N DUF1400 Feature: gene Location: 70204-71424 bp Feature: gene Location: 71962-72585 bp Feature: domain Description: GIIM Note: maturase Location: 71968-72181 bp Feature: domain Description: GIIM Note: maturase Location: 71968-72181 bp Feature: domain Description: HNHc Note: nucleases Location: 72394-72535 bp Feature: domain Description: HNHc Note: nucleases Location: 72394-72535 bp Feature: gene Location: 72632-73003 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72638-72929 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 72638-72929 bp Feature: gene Location: 73007-73540 bp Feature: domain Description: RVT_N Location: 73046-73127 bp Feature: domain Description: RVT_N Location: 73046-73127 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73172-73538 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 73172-73538 bp Feature: gene Location: 73562-73786 bp Feature: domain Description: RVT_N Location: 73631-73781 bp Feature: domain Description: RVT_N Location: 73631-73781 bp Feature: gene Location: 74007-74594 bp Feature: domain Description: DUF1400 Location: 74103-74481 bp Feature: domain Description: DUF1400 Location: 74103-74481 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT GIIM (pfam08388), HNHc (smart00507), RVT-GII, RVT_N (pfam13655), DUF1400 (pfam07176)

Seq: LAYT01000006.1 Arthrospira sp. TJSD091 Contig6, whole genome shotgun sequence (21992 bp)
Overview 1 RT 1: 18620-21938 bp Neighborhood of RT #1 [18620, 21938] Adi1 RVT_N RVT-GII group_II_RT_mat Feature: gene Location: 18620-18793 bp Feature: gene Location: 18989-19507 bp Feature: domain Description: Adi1 Location: 18995-19481 bp Feature: domain Description: Adi1 Location: 18995-19481 bp Feature: gene Location: 20178-21506 bp Feature: domain Description: RVT_N Location: 20244-20487 bp Feature: domain Description: RVT_N Location: 20244-20487 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20532-21201 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20532-21201 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 21264-21501 bp Feature: domain Description: group_II_RT_mat Note: maturase Location: 21264-21501 bp Feature: gene Location: 21615-21938 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Adi1 (COG1791), RVT_N (pfam13655), RVT-GII, group_II_RT_mat (TIGR04416)

Seq: LAYT01000060.1 Arthrospira sp. TJSD091 Contig60, whole genome shotgun sequence (4161 bp)
Overview 1 RT 1: 1-4120 bp Neighborhood of RT #1 [1, 4158] RVT-GII RVT_N RVT-GII GIIM McrA DDE_3 Feature: gene Location: 1-417 bp Feature: gene Location: 521-730 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 533-671 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 533-671 bp Feature: gene Location: 1463-1600 bp Feature: gene Location: 1707-3299 bp Feature: domain Description: RVT_N Location: 1746-1827 bp Feature: domain Description: RVT_N Location: 1746-1827 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1872-2541 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1872-2541 bp Feature: domain Description: GIIM Note: maturase Location: 2652-2856 bp Feature: domain Description: GIIM Note: maturase Location: 2652-2856 bp Feature: domain Description: McrA Location: 3015-3273 bp Feature: domain Description: McrA Location: 3015-3273 bp Feature: gene Location: 3571-3699 bp Feature: gene Location: 3736-4158 bp Feature: domain Description: DDE_3 Location: 3745-4120 bp Feature: domain Description: DDE_3 Location: 3745-4120 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, RVT_N (pfam13655), GIIM (pfam08388), McrA (COG4058), DDE_3 (pfam13358)

Seq: LAYT01000086.1 Arthrospira sp. TJSD091 Contig86, whole genome shotgun sequence (44218 bp)
Overview 1 RT 1: 34862-37888 bp Neighborhood of RT #1 [34862, 37888] DUF3493 HNH RVT-GII Feature: gene Location: 34862-35143 bp Feature: domain Description: DUF3493 Location: 34910-35123 bp Feature: domain Description: DUF3493 Location: 34910-35 123 bp Feature: gene Location: 35201-35518 bp Feature: domain Description: HNH Note: nucleases Location: 35240-35351 bp Feature: domain Description: HNH Note: nucleases Location: 35 240-35 35 1 bp Feature: gene Location: 36173-36508 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36179-36506 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 36179-36506 bp Feature: gene Location: 36500-36670 bp Feature: gene Location: 37730-37888 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3493 (pfam11998), HNH (pfam01844), RVT-GII

Seq: LAYT01000088.1 Arthrospira sp. TJSD091 Contig88, whole genome shotgun sequence (53630 bp)
Overview 1 RT 1: 8001-12279 bp Neighborhood of RT #1 [8001, 12284] RVT_N RVT-GII RVT-GII GIIM HNHc S_TKc YfmG Feature: gene Location: 8001-8318 bp Feature: gene Location: 8505-8642 bp Feature: gene Location: 8533-9105 bp Feature: domain Description: RVT_N Location: 8572-8815 bp Feature: domain Description: RVT_N Location: 8572-8815 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8860-9088 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8860-9088 bp Feature: gene Location: 9095-9520 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9101-9518 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 9101-9518 bp Feature: gene Location: 9647-10285 bp Feature: domain Description: GIIM Note: maturase Location: 9653-9854 bp Feature: domain Description: GIIM Note: maturase Location: 9653-9854 bp Feature: domain Description: HNHc Note: nucleases Location: 10076-10223 bp Feature: domain Description: HNHc Note: nucleases Location: 10076-10223 bp Feature: gene Location: 10500-12284 bp Feature: domain Description: S_TKc Location: 10605-11334 bp Feature: domain Description: S_TKc Location: 10605-11334 bp Feature: domain Description: YfmG Location: 11334-12279 bp Feature: domain Description: YfmG Location: 11334-12279 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507), S_TKc (smart00220), YfmG (COG1262)

Seq: LAYT01000089.1 Arthrospira sp. TJSD091 Contig89, whole genome shotgun sequence (70577 bp)
Overview 1 RT 1: 66-6115 bp Neighborhood of RT #1 [66, 6141] HemH PitA RVT_N RVT-GII GIIM McrA Feature: gene Location: 66-1280 bp Feature: domain Description: HemH Location: 156-1140 bp Feature: domain Description: HemH Location: 156-1140 bp Feature: gene Location: 1383-2648 bp Feature: domain Description: PitA Location: 1416-2637 bp Feature: domain Description: PitA Location: 1416-2637 bp Feature: gene Location: 3415-4743 bp Feature: domain Description: RVT_N Location: 3481-3724 bp Feature: domain Description: RVT_N Location: 3481-37 24 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3769-4438 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37 69-4438 bp Feature: domain Description: GIIM Note: maturase Location: 4573-4735 bp Feature: domain Description: GIIM Note: maturase Location: 4573-4735 bp Feature: gene Location: 4852-5175 bp Feature: gene Location: 5620-6141 bp Feature: domain Description: McrA Location: 5857-6115 bp Feature: domain Description: McrA Location: 5857-6115 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HemH (COG0276), PitA (COG0306), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), McrA (COG4058)

Seq: LAYT01000093.1 Arthrospira sp. TJSD091 Contig93, whole genome shotgun sequence (123908 bp)
Overview 1 RT 1: 1-3519 bp Neighborhood of RT #1 [1, 3578] RVT_N RVT-GII UgpE DUF3153 Feature: gene Location: 1-1032 bp Feature: domain Description: RVT_N Location: 67-310 bp Feature: domain Description: RVT_N Location: 67-310 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 355-1027 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 355-1027 bp Feature: gene Location: 1882-2697 bp Feature: domain Description: UgpE Location: 1909-2692 bp Feature: domain Description: UgpE Location: 1909-2692 bp Feature: gene Location: 2781-3578 bp Feature: domain Description: DUF3153 Location: 2862-3519 bp Feature: domain Description: DUF3153 Location: 2862-3519 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, UgpE (COG0395), DUF3153 (pfam11353)

Seq: LAYT01000096.1 Arthrospira sp. TJSD091 Contig96, whole genome shotgun sequence (6881 bp)
Overview 1 RT 1: 3216-6878 bp Neighborhood of RT #1 [3216, 6878] InsQ GIIM McrA RVT_N RVT-GII Feature: gene Location: 3216-4493 bp Feature: domain Description: InsQ Location: 3288-4398 bp Feature: domain Description: InsQ Location: 3288-439 8 bp Feature: gene Location: 4432-5118 bp Feature: domain Description: GIIM Note: maturase Location: 4438-4648 bp Feature: domain Description: GIIM Note: maturase Location: 4438-4648 bp Feature: domain Description: McrA Location: 4738-5008 bp Feature: domain Description: McrA Location: 4738-5008 bp Feature: gene Location: 5267-6241 bp Feature: domain Description: RVT_N Location: 5315-5561 bp Feature: domain Description: RVT_N Location: 5315-5561 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5603-6215 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5603-6215 bp Feature: gene Location: 6678-6878 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT InsQ (COG0675), GIIM (pfam08388), McrA (COG4058), RVT_N (pfam13655), RVT-GII

Seq: LAYT01000097.1 Arthrospira sp. TJSD091 Contig97, whole genome shotgun sequence (4872 bp)
Overview 1 RT 1: 113-2797 bp Neighborhood of RT #1 [113, 2797] RVT_N RVT-GII GIIM Feature: gene Location: 113-436 bp Feature: gene Location: 545-1654 bp Feature: domain Description: RVT_N Location: 551-635 bp Feature: domain Description: RVT_N Location: 551-635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 680-1349 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 680-1349 bp Feature: domain Description: GIIM Note: maturase Location: 1484-1646 bp Feature: domain Description: GIIM Note: maturase Location: 1484-1646 bp Feature: gene Location: 1737-1874 bp Feature: gene Location: 2468-2797 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)