myRT

myRT report for GCA_000974285.1_ASM97428v1

Download annotations/find similar RTs

Seq: LAZH01000005.1 Bacilli bacterium VT-13-104 contig005, whole genome shotgun sequence (247699 bp)
Overview 1 RT 1: 45-3260 bp Neighborhood of RT #1 [45, 3265] RVT-GII GIIM PRK00996 PRK14126 Feature: gene Location: 45-1304 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 240-858 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 240-858 bp Feature: domain Description: GIIM Note: maturase Location: 909-1140 bp Feature: domain Description: GIIM Note: maturase Location: 909-1 1 40 bp Feature: gene Location: 1905-2795 bp Feature: domain Description: PRK00996 Location: 1911-2790 bp Feature: domain Description: PRK00996 Location: 1 91 1 -2790 bp Feature: gene Location: 3002-3265 bp Feature: domain Description: PRK14126 Location: 3011-3260 bp Feature: domain Description: PRK1 41 26 Location: 301 1 -3260 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK00996 (ribonuclease HIII; Provisional), PRK14126 (cell division protein ZapA; Provisional), RVT-GII, GIIM (pfam08388)

Seq: LAZH01000038.1 Bacilli bacterium VT-13-104 contig038, whole genome shotgun sequence (79230 bp)
Overview 1 RT 1: 552-5498 bp Neighborhood of RT #1 [552, 5500] RVT-GII GIIM LysM LysM 3D pheT Feature: gene Location: 552-1811 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 747-1365 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 747-1365 bp Feature: domain Description: GIIM Note: maturase Location: 1416-1647 bp Feature: domain Description: GIIM Note: maturase Location: 1416-1647 bp Feature: gene Location: 1896-2687 bp Feature: domain Description: LysM Location: 1971-2094 bp Feature: domain Description: LysM Location: 1971-2 094 bp Feature: domain Description: LysM Location: 2151-2277 bp Feature: domain Description: LysM Location: 2 151-2 2 77 bp Feature: domain Description: 3D Location: 2367-2679 bp Feature: domain Description: 3D Location: 2 367-2 679 bp Feature: gene Location: 3074-5500 bp Feature: domain Description: pheT Location: 3077-5498 bp Feature: domain Description: pheT Location: 3077-5498 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LysM (smart00257), 3D (pfam06725), pheT (PRK09616), RVT-GII, GIIM (pfam08388)