myRT

myRT report for GCA_000974565.1_ASM97456v1

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Seq: BBQK01000076.1 (2426 bp)
Overview 1 RT 1: 1-2292 bp Neighborhood of RT #1 [1, 2339] RVT_N RVT-GII GIIM HNHc Feature: gene Location: 1-192 bp Feature: gene Location: 223-351 bp Feature: gene Location: 621-2339 bp Feature: domain Description: RVT_N Location: 678-915 bp Feature: domain Description: RVT_N Location: 678-91 5 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 966-1617 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 966-1 61 7 bp Feature: domain Description: GIIM Note: maturase Location: 1671-1902 bp Feature: domain Description: GIIM Note: maturase Location: 1 671 -1 902 bp Feature: domain Description: HNHc Note: nucleases Location: 2136-2292 bp Feature: domain Description: HNHc Note: nucleases Location: 21 36-2292 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNHc (smart00507)

Seq: BBQK01000006.1 (455053 bp)
Overview 1 RT 1: 1-4275 bp Neighborhood of RT #1 [1, 4439] COG3666 RVT-UG2 PRK06333 HxlR Feature: gene Location: 1-564 bp Feature: domain Description: COG3666 Location: 13-490 bp Feature: domain Description: COG3666 Location: 13-490 bp Feature: gene Location: 711-2057 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 960-1746 bp Feature: RT Description: RVT-UG2 Note: UG2 RT Location: 960-1746 bp Feature: gene Location: 2556-3824 bp Feature: domain Description: PRK06333 Location: 2562-3819 bp Feature: domain Description: PRK06333 Location: 2 562 -3819 bp Feature: gene Location: 3933-4439 bp Feature: domain Description: HxlR Location: 3957-4275 bp Feature: domain Description: HxlR Location: 3957-42 75 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3666 (Transposase ), RVT-UG2, PRK06333 (beta-ketoacyl-ACP synthase), HxlR (pfam01638)

Seq: BBQK01000077.1 (2351 bp)
Overview 1 RT 1: 581-1835 bp Neighborhood of RT #1 [581, 2242] RVT_N RVT-GII GIIM Feature: gene Location: 581-2242 bp Feature: domain Description: RVT_N Location: 626-869 bp Feature: domain Description: RVT_N Location: 626-869 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 914-1550 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 914-1550 bp Feature: domain Description: GIIM Note: maturase Location: 1607-1835 bp Feature: domain Description: GIIM Note: maturase Location: 1607-183 5 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)