myRT

myRT report for GCA_000974625.1_ASM97462v1

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Seq: BBQO01000022.1 Pseudomonas toyotomiensis DNA, contig: 02101, whole genome shotgun sequence (7649 bp)
Overview 1 RT 1: 65-3295 bp Neighborhood of RT #1 [65, 3342] RVT-GII GIIM IS5 LysR Feature: gene Location: 65-1333 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 278-935 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 278-935 bp Feature: domain Description: GIIM Note: maturase Location: 1013-1235 bp Feature: domain Description: GIIM Note: maturase Location: 1 01 3-1 235 bp Feature: gene Location: 1826-2365 bp Feature: domain Description: IS5 Location: 2015-2342 bp Feature: domain Description: IS5 Location: 201 5-2342 bp Feature: gene Location: 2473-3342 bp Feature: domain Description: LysR Location: 2491-3295 bp Feature: domain Description: LysR Location: 2491 -3295 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IS5 (COG3039), LysR (COG0583), RVT-GII, GIIM (pfam08388)

Seq: BBQO01000009.1 Pseudomonas toyotomiensis DNA, contig: 00601, whole genome shotgun sequence (368687 bp)
Overview 1 RT 1: 364608-368100 bp Neighborhood of RT #1 [364608, 368321] IS5 IS5 RVT_N RVT-GII GIIM Feature: gene Location: 364608-365588 bp Feature: domain Description: IS5 Location: 364797-365562 bp Feature: domain Description: IS5 Location: 364797-365562 bp Feature: gene Location: 366285-366725 bp Feature: domain Description: IS5 Location: 366291-366699 bp Feature: domain Description: IS5 Location: 3662 91-366699 bp Feature: gene Location: 366816-368321 bp Feature: RT Description: RVT_N Location: 366897-367122 bp Feature: RT Description: RVT_N Location: 366897-36712 2 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 367173-367815 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 367173-367815 bp Feature: domain Description: GIIM Note: maturase Location: 367866-368100 bp Feature: domain Description: GIIM Note: maturase Location: 367866-368100 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT IS5 (COG3039), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)