myRT

myRT report for GCA_000974745.1_ASM97474v1

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Seq: BBVB01000033.1 Bordetella bronchiseptica DNA, contig: contig33, whole genome shotgun sequence (41028 bp)
Overview 1 RT 1: 37065-39873 bp Neighborhood of RT #1 [37065, 39873] DUF1566 Avd_like RVT-DGRs Feature: gene Location: 37065-37478 bp Feature: domain Description: DUF1566 Location: 37233-37455 bp Feature: domain Description: DUF1 566 Location: 37233-37455 bp Feature: gene Location: 37507-37893 bp Feature: domain Description: Avd_like Location: 37534-37840 bp Feature: domain Description: Avd_like Location: 37534-37840 bp Feature: gene Location: 38153-39238 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 38339-39086 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 38339-39086 bp Feature: gene Location: 39278-39415 bp Feature: gene Location: 39418-39873 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs

Seq: BBVB01000003.1 Bordetella bronchiseptica DNA, contig: contig3, whole genome shotgun sequence (258546 bp)
Overview 1 RT 1: 209577-213265 bp Neighborhood of RT #1 [209577, 213285] RVT-GII GIIM DUF3085 Feature: gene Location: 209577-209855 bp Feature: gene Location: 210021-210179 bp Feature: gene Location: 210289-211659 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 210622-211240 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 1062 2 -2 112 40 bp Feature: domain Description: GIIM Note: maturase Location: 211297-211507 bp Feature: domain Description: GIIM Note: maturase Location: 2 112 97-2 11507 bp Feature: gene Location: 211957-212811 bp Feature: gene Location: 212968-213285 bp Feature: domain Description: DUF3085 Location: 212998-213265 bp Feature: domain Description: DUF3085 Location: 2 12 998-2 132 65 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), DUF3085 (pfam11284)