myRT

myRT report for GCA_000978625.2_ASM97862v2

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Seq: AYRI01000133.1 Pseudomonas avellanae CRAFRUed2 contig133, whole genome shotgun sequence (1327 bp)
Overview 1 RT 1: 2-1327 bp Neighborhood of RT #1 [2, 1326] RVT-GII Feature: gene Location: 2-286 bp Feature: gene Location: 511-1326 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 751-1327 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 751 -1 327 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII

Seq: AYRI01000323.1 Pseudomonas avellanae CRAFRUed2 contig323, whole genome shotgun sequence (20191 bp)
Overview 1 RT 1: 1-6955 bp Neighborhood of RT #1 [1, 6957] autotrans_barl RVT-GII GIIM FimA Feature: gene Location: 1-2196 bp Feature: domain Description: autotrans_barl Location: 979-2194 bp Feature: domain Description: autotrans_barl Location: 979-2 194 bp Feature: gene Location: 2221-2649 bp Feature: gene Location: 2768-4093 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3029-3644 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 302 9-3644 bp Feature: domain Description: GIIM Note: maturase Location: 3701-3926 bp Feature: domain Description: GIIM Note: maturase Location: 3701-392 6 bp Feature: gene Location: 4293-5798 bp Feature: gene Location: 5836-6957 bp Feature: domain Description: FimA Location: 6469-6955 bp Feature: domain Description: FimA Location: 6469-6955 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT autotrans_barl (TIGR01414), RVT-GII, GIIM (pfam08388), FimA (pfam16970)