myRT

myRT report for GCA_000978945.1_gtlEnvA5udCFS

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Seq: JJPB01000085.1 Methanosarcina mazei strain 3.F.A.1A.3 scaffold9_1_size76778-refined, whole genome shotgun sequence (76511 bp)
Overview 1 RT 1: 3795-6276 bp Neighborhood of RT #1 [3795, 6596] Cmr1 Cmr1 Cas6b_N Cas6b_C RVT-CRISPR Feature: gene Location: 3795-4628 bp Ori: KKG31108.1 Feature: domain Description: Cmr1 Location: 3804-4038 bp Feature: domain Description: Cmr1 Location: 3804-4038 bp Feature: domain Description: Cmr1 Location: 4473-4575 bp Feature: domain Description: Cmr1 Location: 4473-4575 bp Feature: gene Location: 4676-5335 bp Ori: KKG31109.1 Feature: domain Description: Cas6b_N Location: 4682-4982 bp Feature: domain Description: Cas6b_N Location: 4682-4982 bp Feature: domain Description: Cas6b_C Location: 4994-5327 bp Feature: domain Description: Cas6b_C Location: 4994-5327 bp Feature: gene Location: 5472-6596 bp Ori: KKG31110.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 5652-6276 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 5652-6276 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cmr1 (COG1367), Cas6b_N (pfam17955), Cas6b_C, RVT-CRISPR

Seq: JJPB01000042.1 Methanosarcina mazei strain 3.F.A.1A.3 scaffold27_1_size44723-refined, whole genome shotgun sequence (44626 bp)
Overview 1 RT 1: 12424-21201 bp Neighborhood of RT #1 [12424, 21206] YkvA COG1669 RVT-Retrons Lhr lysS Feature: gene Location: 12424-12816 bp Ori: KKG33467.1 Feature: domain Description: YkvA Location: 12523-12811 bp Feature: domain Description: YkvA Location: 12 52 3-12 811 bp Feature: gene Location: 13434-13730 bp Ori: KKG33468.1 Feature: domain Description: COG1669 Location: 13437-13719 bp Feature: domain Description: COG1669 Location: 13437-13719 bp Feature: gene Location: 14725-16407 bp Ori: KKG33469.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 14965-15505 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 14965-15505 bp Feature: gene Location: 16423-19317 bp Ori: KKG33470.1 Feature: domain Description: Lhr Location: 16438-18949 bp Feature: domain Description: Lhr Location: 16438-18949 bp Feature: gene Location: 19671-21206 bp Ori: KKG33471.1 Feature: domain Description: lysS Location: 19764-21201 bp Feature: domain Description: lysS Location: 19764-2 12 01 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT YkvA (COG3339), COG1669 (Predicted nucleotidyltransferase ), RVT-Retrons, Lhr (COG1201), lysS (PRK02983)