myRT

myRT report for GCA_000979095.1_gtlEnvA5udCFS

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Seq: JJPX01000024.1 Methanosarcina mazei strain 3.H.M.2.7 scaffold147_1_size4776-refined, whole genome shotgun sequence (4776 bp)
Overview 1 RT 1: 1715-4125 bp Neighborhood of RT #1 [1715, 4325] COG4584 RVT_N RVT-GII GIIM Feature: gene Location: 1715-2404 bp Feature: domain Description: COG4584 Location: 1718-2285 bp Feature: domain Description: COG4584 Location: 1 71 8-2285 bp Feature: gene Location: 2826-4325 bp Feature: RT Description: RVT_N Location: 2895-3138 bp Feature: RT Description: RVT_N Location: 2895-31 38 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3183-3840 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31 83-3840 bp Feature: domain Description: GIIM Note: maturase Location: 3894-4125 bp Feature: domain Description: GIIM Note: maturase Location: 3894-41 25 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4584 (Transposase ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JJPX01000156.1 Methanosarcina mazei strain 3.H.M.2.7 scaffold12_1_size79455-refined, whole genome shotgun sequence (79270 bp)
Overview 1 RT 1: 71877-79172 bp Neighborhood of RT #1 [71877, 79216] lysS Lhr RVT-Retrons HTH_23 Tra5 Feature: gene Location: 71877-73412 bp Feature: domain Description: lysS Location: 71970-73407 bp Feature: domain Description: lysS Location: 71970-73407 bp Feature: gene Location: 73766-76660 bp Feature: domain Description: Lhr Location: 73781-76292 bp Feature: domain Description: Lhr Location: 73781-762 92 bp Feature: gene Location: 76676-78205 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 76763-77303 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 76763-77303 bp Feature: gene Location: 78299-79216 bp Feature: domain Description: HTH_23 Location: 78320-78428 bp Feature: domain Description: HTH_2 3 Location: 7832 0-7842 8 bp Feature: domain Description: Tra5 Location: 78464-79172 bp Feature: domain Description: Tra5 Location: 78464-79172 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT lysS (PRK02983), Lhr (COG1201), RVT-Retrons, HTH_23 (pfam13384), Tra5 (COG2801)