myRT

myRT report for GCA_000979205.1_gtlEnvA5udCFS

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Seq: JJQO01000155.1 Methanosarcina mazei strain 1.H.A.2.7 scaffold7_1_size73017-refined, whole genome shotgun sequence (73017 bp)
Overview 1 RT 1: 24650-27484 bp Neighborhood of RT #1 [24650, 27804] DUF1887 DUF1887 Cas6b_N Cas6b_C RVT-CRISPR Feature: gene Location: 24650-25843 bp Ori: KKH64813.1 Feature: domain Description: DUF1887 Location: 24794-25016 bp Feature: domain Description: DUF1 887 Location: 24794-2501 6 bp Feature: domain Description: DUF1887 Location: 25415-25715 bp Feature: domain Description: DUF1 887 Location: 2541 5-2571 5 bp Feature: gene Location: 25884-26558 bp Ori: KKH64814.1 Feature: domain Description: Cas6b_N Location: 25905-26205 bp Feature: domain Description: Cas6b_N Location: 25905-26205 bp Feature: domain Description: Cas6b_C Location: 26217-26550 bp Feature: domain Description: Cas6b_C Location: 2621 7-26550 bp Feature: gene Location: 26680-27804 bp Ori: KKH64815.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 26860-27484 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 26860-27484 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1887 (pfam09002), Cas6b_N (pfam17955), Cas6b_C, RVT-CRISPR

Seq: JJQO01000101.1 Methanosarcina mazei strain 1.H.A.2.7 scaffold28_1_size60823-refined, whole genome shotgun sequence (60608 bp)
Overview 1 RT 1: 57650-60607 bp Neighborhood of RT #1 [57650, 60608] COG4584 RVT_N RVT-GII GIIM Feature: gene Location: 57650-58039 bp Feature: gene Location: 58221-58910 bp Ori: KKH66535.1 Feature: domain Description: COG4584 Location: 58224-58791 bp Feature: domain Description: COG4584 Location: 582 2 4-58791 bp Feature: gene Location: 59338-60608 bp Ori: KKH66536.1 Feature: domain Description: RVT_N Location: 59407-59650 bp Feature: domain Description: RVT_N Location: 59407-59650 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59695-60352 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 59695-60352 bp Feature: domain Description: GIIM Note: maturase Location: 60406-60607 bp Feature: domain Description: GIIM Note: maturase Location: 60406-60607 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4584 (Transposase ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)