myRT

myRT report for GCA_000979915.1_gtlEnvA5udCFS

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Seq: JJQG01000083.1 Methanosarcina mazei strain 1.H.A.1A.1 scaffold155_1_size1855-refined, whole genome shotgun sequence (1755 bp)
Overview 1 RT 1: 489-1755 bp Neighborhood of RT #1 [489, 1755] RVT_N RVT-GII GIIM Feature: gene Location: 489-1755 bp Ori: KKH38697.1 Feature: domain Description: RVT_N Location: 558-801 bp Feature: domain Description: RVT_N Location: 558-801 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 846-1503 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 846-1 503 bp Feature: domain Description: GIIM Note: maturase Location: 1557-1755 bp Feature: domain Description: GIIM Note: maturase Location: 1 557-1 755 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: JJQG01000013.1 Methanosarcina mazei strain 1.H.A.1A.1 scaffold82_1_size16104-refined, whole genome shotgun sequence (16104 bp)
Overview 1 RT 1: 4306-7332 bp Neighborhood of RT #1 [4306, 7460] RVT-CRISPR Cas6b_N Cas6b_C DUF1887 DUF1887 Feature: gene Location: 4306-5430 bp Ori: KKH42678.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 4486-5110 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 4486-5110 bp Feature: gene Location: 5552-6226 bp Ori: KKH42679.1 Feature: domain Description: Cas6b_N Location: 5573-5873 bp Feature: domain Description: Cas6b_N Location: 5573-5873 bp Feature: domain Description: Cas6b_C Location: 5885-6218 bp Feature: domain Description: Cas6b_C Location: 5885-62 18 bp Feature: gene Location: 6267-7460 bp Ori: KKH42680.1 Feature: domain Description: DUF1887 Location: 6411-6633 bp Feature: domain Description: DUF1887 Location: 6411-6633 bp Feature: domain Description: DUF1887 Location: 7032-7332 bp Feature: domain Description: DUF1887 Location: 7032 -7332 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR, Cas6b_N (pfam17955), Cas6b_C, DUF1887 (pfam09002)