myRT

myRT report for GCA_000980675.1_ASM98067v1

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Seq: LBCI01000021.1 Eubacterium sp. UNK.MGS-25 contig_21, whole genome shotgun sequence (18281 bp)
Overview 1 RT 1: 9609-14467 bp Neighborhood of RT #1 [9609, 14490] RicinB_lectin_2 RicinB_lectin_2 T4SS-DNA_transf RVT_N RVT-GII GIIM HNH VirD4 Feature: gene Location: 9609-10142 bp Feature: domain Description: RicinB_lectin_2 Location: 9717-9939 bp Feature: domain Description: RicinB_lectin_2 Location: 971 7-9939 bp Feature: domain Description: RicinB_lectin_2 Location: 9999-10128 bp Feature: domain Description: RicinB_lectin_2 Location: 9999-1 01 28 bp Feature: gene Location: 10430-11113 bp Feature: domain Description: T4SS-DNA_transf Location: 10709-10943 bp Feature: domain Description: T4SS-DNA_transf Location: 1 0709-1 0943 bp Feature: gene Location: 10950-12653 bp Feature: domain Description: RVT_N Location: 11052-11286 bp Feature: domain Description: RVT_N Location: 1 1 052-1 1 286 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 11340-12000 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 1 340-1 2000 bp Feature: domain Description: GIIM Note: maturase Location: 12051-12288 bp Feature: domain Description: GIIM Note: maturase Location: 1 2051 -1 2288 bp Feature: domain Description: HNH Note: nucleases Location: 12501-12618 bp Feature: domain Description: HNH Note: nucleases Location: 1 2501 -1 261 8 bp Feature: gene Location: 12867-13037 bp Feature: gene Location: 13153-14490 bp Feature: domain Description: VirD4 Location: 13282-14467 bp Feature: domain Description: VirD4 Location: 1 3282-1 4467 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RicinB_lectin_2 (pfam14200), T4SS-DNA_transf (pfam02534), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), VirD4 (COG3505)

Seq: LBCI01000038.1 Eubacterium sp. UNK.MGS-25 contig_38, whole genome shotgun sequence (10328 bp)
Overview 1 RT 1: 2080-7681 bp Neighborhood of RT #1 [2080, 7681] TrbC TraG-D_C RVT-GII Intron_maturas2 VirD4 Feature: gene Location: 2080-2439 bp Feature: domain Description: TrbC Location: 2161-2431 bp Feature: domain Description: TrbC Location: 2 161-2 431 bp Feature: gene Location: 2414-3118 bp Feature: domain Description: TraG-D_C Location: 2480-2834 bp Feature: domain Description: TraG-D_C Location: 2 480-2 834 bp Feature: gene Location: 3227-5194 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3647-4478 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3647-4478 bp Feature: domain Description: Intron_maturas2 Location: 4553-4856 bp Feature: domain Description: Intron_maturas2 Location: 4553-4856 bp Feature: gene Location: 5667-6878 bp Feature: domain Description: VirD4 Location: 5967-6852 bp Feature: domain Description: VirD4 Location: 5967-6852 bp Feature: gene Location: 6821-7681 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT TrbC (pfam04956), TraG-D_C (pfam12696), RVT-GII, Intron_maturas2 (pfam01348), VirD4 (COG3505)

Seq: LBCI01000067.1 Eubacterium sp. UNK.MGS-25 contig_67, whole genome shotgun sequence (3821 bp)
Overview 1 RT 1: 199-3820 bp Neighborhood of RT #1 [199, 3820] RVT-UG5 nitrilase Feature: gene Location: 199-3309 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 685-1153 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 685-1153 bp Feature: domain Description: nitrilase Location: 2506-3175 bp Feature: domain Description: nitrilase Location: 2506-3 175 bp Feature: gene Location: 3629-3820 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG5, nitrilase (cl11424)