myRT

myRT report for GCA_000987395.1_ASM98739v1

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Seq: LBIV01000049.1 Candidatus Accumulibacter phosphatis isolate HKU-2 contig2054, whole genome shotgun sequence (12022 bp)
Overview 1 RT 1: 5507-7993 bp Neighborhood of RT #1 [5507, 7993] RVT-GII SGNH_arylesterase_like Feature: gene Location: 5507-5914 bp Feature: gene Location: 6271-6417 bp Feature: gene Location: 6449-6829 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6458-6812 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6458-681 2 bp Feature: gene Location: 6900-7550 bp Feature: domain Description: SGNH_arylesterase_like Location: 6909-7524 bp Feature: domain Description: SGNH_arylesterase_like Location: 6909-7524 bp Feature: gene Location: 7817-7993 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, SGNH_arylesterase_like (cd01839)

Seq: LBIV01000301.1 Candidatus Accumulibacter phosphatis isolate HKU-2 contig21968, whole genome shotgun sequence (8906 bp)
Overview 1 RT 1: 3-1605 bp Neighborhood of RT #1 [3, 1605] RVT-CRISPR-like Feature: gene Location: 3-1013 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 243-852 bp Feature: RT Description: RVT-CRISPR-like Note: CRISPR-like RT Location: 2 43-852 bp Feature: gene Location: 985-1353 bp Feature: gene Location: 1429-1605 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-CRISPR

Seq: LBIV01000303.1 Candidatus Accumulibacter phosphatis isolate HKU-2 contig22116, whole genome shotgun sequence (11432 bp)
Overview 1 RT 1: 2-5501 bp Neighborhood of RT #1 [2, 5506] RVT-UG7 DUF1883 TIR_2 PRK06948 PRK07562 Feature: gene Location: 2-1504 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 407-815 bp Feature: RT Description: RVT-UG7 Note: UG7 RT Location: 407-815 bp Feature: gene Location: 1574-2347 bp Feature: domain Description: DUF1883 Location: 1577-1841 bp Feature: domain Description: DUF1883 Location: 1577-1841 bp Feature: domain Description: TIR_2 Location: 1943-2279 bp Feature: domain Description: TIR_2 Location: 1943 -2279 bp Feature: gene Location: 2597-5506 bp Feature: domain Description: PRK06948 Location: 2660-4403 bp Feature: domain Description: PRK06948 Location: 2660-4403 bp Feature: domain Description: PRK07562 Location: 5402-5501 bp Feature: domain Description: PRK07562 Location: 5402-5501 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-UG7, DUF1883 (pfam08980), TIR_2 (pfam13676), PRK06948 (ribonucleotide reductase-like protein; Provisional), PRK07562 (vitamin B12-dependent ribonucleotide reductase)

Seq: LBIV01000153.1 Candidatus Accumulibacter phosphatis isolate HKU-2 contig7829, whole genome shotgun sequence (15097 bp)
Overview 1 RT 1: 3-1719 bp Neighborhood of RT #1 [3, 2156] RVT-GII RAYT Feature: gene Location: 3-581 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 261-531 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 261-531 bp Feature: gene Location: 779-940 bp Feature: gene Location: 1101-2156 bp Feature: domain Description: RAYT Location: 1329-1719 bp Feature: domain Description: RAYT Location: 1329-1719 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, RAYT (COG1943)