myRT

myRT report for GCA_000987535.1_ASM98753v1

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Seq: LBBD01000021.1 (64970 bp)
Overview 1 RT 1: 46785-50668 bp Neighborhood of RT #1 [46785, 50673] rph pyrE RVT-Retrons slmA dut Feature: gene Location: 46785-47501 bp Feature: domain Description: rph Location: 46788-47496 bp Feature: domain Description: rph Location: 46788-47496 bp Feature: gene Location: 47568-48209 bp Feature: domain Description: pyrE Location: 47571-48204 bp Feature: domain Description: pyrE Location: 47571 -48204 bp Feature: gene Location: 48507-49466 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 48642-49191 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 48642-491 91 bp Feature: gene Location: 49512-50108 bp Feature: domain Description: slmA Location: 49518-50094 bp Feature: domain Description: slmA Location: 4951 8-50094 bp Feature: gene Location: 50215-50673 bp Feature: domain Description: dut Location: 50221-50668 bp Feature: domain Description: dut Location: 50221 -50668 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rph (PRK00173), pyrE (TIGR00336), RVT-Retrons, slmA (PRK09480), dut (TIGR00576)

Seq: LBBD01000125.1 (7964 bp)
Overview 1 RT 1: 3746-7282 bp Neighborhood of RT #1 [3746, 7282] DUF905 PRK13732 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 3746-3979 bp Feature: domain Description: DUF905 Location: 3776-3974 bp Feature: domain Description: DUF905 Location: 3776-3974 bp Feature: gene Location: 4047-4544 bp Feature: domain Description: PRK13732 Location: 4050-4542 bp Feature: domain Description: PRK13732 Location: 4050-4542 bp Feature: gene Location: 4694-6595 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4961-5792 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4961-5792 bp Feature: domain Description: Intron_maturas2 Location: 5906-6164 bp Feature: domain Description: Intron_maturas2 Location: 5906-6164 bp Feature: domain Description: HNHc Note: nucleases Location: 6338-6500 bp Feature: domain Description: HNHc Note: nucleases Location: 6338-6500 bp Feature: gene Location: 7052-7282 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF905 (pfam06006), PRK13732 (single-stranded DNA-binding protein; Provisional), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)