myRT

myRT report for GCA_000987765.1_ASM98776v1

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Seq: LAHP01000027.1 Arsukibacterium sp. MJ3 EFN4V4QW, whole genome shotgun sequence (36168 bp)
Overview 1 RT 1: 26929-34145 bp Neighborhood of RT #1 [26929, 34165] RVT-Retrons CadC1 TPR TPR TPR Feature: gene Location: 26929-29349 bp Feature: gene Location: 29324-29809 bp Feature: gene Location: 30654-31853 bp Ori: KKO47755.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 30798-31401 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 30798-31 401 bp Feature: gene Location: 32622-32918 bp Feature: gene Location: 32915-34165 bp Ori: KKO47757.1 Feature: domain Description: CadC1 Location: 32999-33254 bp Feature: domain Description: CadC1 Location: 32999-33254 bp Feature: domain Description: TPR Location: 33413-33542 bp Feature: domain Description: TPR Location: 3341 3-33542 bp Feature: domain Description: TPR Location: 33629-33878 bp Feature: domain Description: TPR Location: 33629-33878 bp Feature: domain Description: TPR Location: 33953-34145 bp Feature: domain Description: TPR Location: 33953-341 45 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, CadC1 (COG3710), TPR (smart00028)

Seq: LAHP01000021.1 Arsukibacterium sp. MJ3 EFN4V4QP, whole genome shotgun sequence (58943 bp)
Overview 1 RT 1: 1-5730 bp Neighborhood of RT #1 [1, 5762] DUF3644 EC042_2821 RVT-UG12 RMtype1_S_BceB55ORF5615P-TRD2-CR2_like HsdS RMtype1_S_BceB55ORF5615P-TRD2-CR2_like Feature: gene Location: 1-235 bp Feature: gene Location: 346-1662 bp Ori: KKO47979.1 Feature: domain Description: DUF3644 Location: 727-931 bp Feature: domain Description: DUF3644 Location: 72 7-931 bp Feature: domain Description: EC042_2821 Location: 1054-1633 bp Feature: domain Description: EC042 _2 82 1 Location: 1054-1633 bp Feature: gene Location: 1683-3272 bp Ori: KKO47980.1 Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 2091-2505 bp Feature: RT Description: RVT-UG12 Note: UG12 RT Location: 2 091-2 505 bp Feature: gene Location: 3286-3975 bp Feature: gene Location: 3972-5762 bp Ori: KKO47982.1 Feature: domain Description: RMtype1_S_BceB55ORF5615P-TRD2-CR2_like Location: 4344-4836 bp Feature: domain Description: RMtype1_S_BceB55ORF5615P-TRD2 -CR2 _like Location: 4344-4836 bp Feature: domain Description: HsdS Location: 4905-5145 bp Feature: domain Description: HsdS Location: 4905-5145 bp Feature: domain Description: RMtype1_S_BceB55ORF5615P-TRD2-CR2_like Location: 5166-5730 bp Feature: domain Description: RMtype1_S_BceB55ORF5615P-TRD2 -CR2 _like Location: 5166-5730 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3644 (pfam12358), EC042_2821 (pfam18740), RVT-UG12, RMtype1_S_BceB55ORF5615P-TRD2-CR2_like (cd17512), HsdS (COG0732)