myRT

myRT report for GCA_000987775.1_ASM98777v1

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Seq: LAHO01000033.1 Arsukibacterium ikkense strain GCM72 contig_32, whole genome shotgun sequence (2449 bp)
Overview 1 RT 1: 329-1756 bp Neighborhood of RT #1 [329, 1839] RVT-GII GIIM Feature: gene Location: 329-511 bp Feature: gene Location: 550-1839 bp Ori: KKO43793.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 805-1471 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 805-1 471 bp Feature: domain Description: GIIM Note: maturase Location: 1576-1756 bp Feature: domain Description: GIIM Note: maturase Location: 1 576-1 756 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388)

Seq: LAHO01000007.1 Arsukibacterium ikkense strain GCM72 contig_5, whole genome shotgun sequence (187120 bp)
Overview 1 RT 1: 49511-58193 bp Neighborhood of RT #1 [49511, 58216] PIN_LabA-like_N_1 LabA_like_C DUF3800 RVT-UG1 RMtype1_S_SonII-TRD2-CR2_like HsdS RMtype1_S_SonII-TRD2-CR2_like HsdM Feature: gene Location: 49511-50287 bp Ori: KKO45752.1 Feature: domain Description: PIN_LabA-like_N_1 Location: 49541-49889 bp Feature: domain Description: PIN_LabA-like_N_1 Location: 49541-49889 bp Feature: domain Description: LabA_like_C Location: 50057-50255 bp Feature: domain Description: LabA_like_C Location: 50057-502 55 bp Feature: gene Location: 50325-51119 bp Ori: KKO45753.1 Feature: domain Description: DUF3800 Location: 50364-50907 bp Feature: domain Description: DUF3800 Location: 50364-50907 bp Feature: gene Location: 52175-54973 bp Ori: KKO45754.1 Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 52817-53339 bp Feature: RT Description: RVT-UG1 Note: UG1 RT Location: 52 817-53339 bp Feature: gene Location: 54970-56736 bp Ori: KKO45755.1 Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 55291-55858 bp Feature: domain Description: RMtype1_S_SonII-TRD2 -CR2 _like Location: 552 91-55858 bp Feature: domain Description: HsdS Location: 55900-56107 bp Feature: domain Description: HsdS Location: 55900-56107 bp Feature: domain Description: RMtype1_S_SonII-TRD2-CR2_like Location: 56161-56704 bp Feature: domain Description: RMtype1_S_SonII-TRD2 -CR2 _like Location: 56161-56704 bp Feature: gene Location: 56741-58216 bp Ori: KKO45756.1 Feature: domain Description: HsdM Location: 56747-58193 bp Feature: domain Description: HsdM Location: 56747-58193 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PIN_LabA-like_N_1 (cd11297), LabA_like_C (cl14879), DUF3800 (pfam12686), RVT-UG1, RMtype1_S_SonII-TRD2-CR2_like (cd17246), HsdS (COG0732), HsdM (COG0286)