myRT

myRT report for GCA_000988945.1_ASM98894v1

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Seq: LCTL01000146.1 Streptomyces europaeiscabiei strain NRRL B-24443 B24443_contig_146, whole genome shotgun sequence (29425 bp)
Overview 1 RT 1: 1588-7260 bp Neighborhood of RT #1 [1588, 7280] FAD_binding_4 RVT_N RVT-GII GIIM HNH InsQ LysR Feature: gene Location: 1588-2151 bp Feature: domain Description: FAD_binding_4 Location: 1780-2125 bp Feature: domain Description: FAD_binding_4 Location: 1 780-21 25 bp Feature: gene Location: 2632-3255 bp Feature: gene Location: 3817-5604 bp Feature: RT Description: RVT_N Location: 3886-4129 bp Feature: RT Description: RVT_N Location: 3886-41 29 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4180-4837 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 41 80-4837 bp Feature: domain Description: GIIM Note: maturase Location: 4891-5125 bp Feature: domain Description: GIIM Note: maturase Location: 4891 -51 25 bp Feature: domain Description: HNH Note: nucleases Location: 5452-5551 bp Feature: domain Description: HNH Note: nucleases Location: 5452-5551 bp Feature: gene Location: 5740-6351 bp Feature: domain Description: InsQ Location: 5860-6295 bp Feature: domain Description: InsQ Location: 5860-6295 bp Feature: gene Location: 6387-7280 bp Feature: domain Description: LysR Location: 6390-7260 bp Feature: domain Description: LysR Location: 6390-7260 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT FAD_binding_4 (pfam01565), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), InsQ (COG0675), LysR (COG0583)

Seq: LCTL01000218.1 Streptomyces europaeiscabiei strain NRRL B-24443 B24443_contig_218, whole genome shotgun sequence (8183 bp)
Overview 1 RT 1: 680-7647 bp Neighborhood of RT #1 [680, 7949] PRK09279 RVT-GII GIIM PRK12467 Feature: gene Location: 680-3427 bp Feature: domain Description: PRK09279 Location: 740-3410 bp Feature: domain Description: PRK092 79 Location: 740-3410 bp Feature: gene Location: 3485-4036 bp Feature: gene Location: 4607-6034 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4928-5612 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 492 8-5612 bp Feature: domain Description: GIIM Note: maturase Location: 5684-5888 bp Feature: domain Description: GIIM Note: maturase Location: 5684-5888 bp Feature: gene Location: 6073-6336 bp Feature: gene Location: 6471-7949 bp Feature: domain Description: PRK12467 Location: 6642-7647 bp Feature: domain Description: PRK12 467 Location: 6642 -7647 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, GIIM (pfam08388), PRK12467 (peptide synthase; Provisional), PRK09279 (pyruvate phosphate dikinase; Provisional)