myRT

myRT report for GCA_000990225.1_ASM99022v1

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Seq: LBPO01000006.1 Candidatus Magasanikbacteria bacterium GW2011_GWC2_34_16 UR53_C0006, whole genome shotgun sequence (9200 bp)
Overview 1 RT 1: 683-7270 bp Neighborhood of RT #1 [683, 7284] PDDEXK_1 RVT-AbiP2 DUF262 DUF262 HNH EcoRI_methylase Feature: gene Location: 683-2632 bp Feature: gene Location: 2815-3561 bp Ori: KKP59174.1 Feature: domain Description: PDDEXK_1 Location: 2878-3535 bp Feature: domain Description: PDDEXK_1 Location: 2878-3535 bp Feature: gene Location: 3571-5073 bp Ori: KKP59175.1 Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 3994-4450 bp Feature: RT Description: RVT-AbiP2 Note: AbiP2 RT Location: 3994-4450 bp Feature: gene Location: 5106-6197 bp Ori: KKP59176.1 Feature: domain Description: DUF262 Location: 5208-5424 bp Feature: domain Description: DUF262 Location: 5208-5424 bp Feature: domain Description: DUF262 Location: 5445-5568 bp Feature: domain Description: DUF262 Location: 5445-5568 bp Feature: domain Description: HNH Note: nucleases Location: 6060-6189 bp Feature: domain Description: HNH Note: nucleases Location: 6060-61 89 bp Feature: gene Location: 6199-7284 bp Ori: KKP59177.1 Feature: domain Description: EcoRI_methylase Location: 6226-7270 bp Feature: domain Description: EcoRI_methylase Location: 6226-7270 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PDDEXK_1 (pfam12705), RVT-AbiP2, DUF262 (pfam03235), HNH (pfam01844), EcoRI_methylase (pfam13651)

Seq: LBPO01000001.1 Candidatus Magasanikbacteria bacterium GW2011_GWC2_34_16 UR53_C0001, whole genome shotgun sequence (172445 bp)
Overview 1 RT 1: 57503-61068 bp Neighborhood of RT #1 [57503, 61148] Avd_like RVT-DGRs RpsF ssb Feature: gene Location: 57503-58453 bp Feature: gene Location: 58420-58842 bp Ori: KKP59544.1 Feature: domain Description: Avd_like Location: 58510-58822 bp Feature: domain Description: Avd_like Location: 58510-5882 2 bp Feature: gene Location: 58845-59972 bp Ori: KKP59545.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 59040-59709 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 59040-59709 bp Feature: gene Location: 60217-60696 bp Ori: KKP59546.1 Feature: domain Description: RpsF Location: 60226-60526 bp Feature: domain Description: RpsF Location: 602 2 6-6052 6 bp Feature: gene Location: 60708-61148 bp Ori: KKP59547.1 Feature: domain Description: ssb Location: 60717-61068 bp Feature: domain Description: ssb Location: 60717-61068 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, RpsF (COG0360), ssb (TIGR00621)

Seq: LBPO01000002.1 Candidatus Magasanikbacteria bacterium GW2011_GWC2_34_16 UR53_C0002, whole genome shotgun sequence (100750 bp)
Overview 1 RT 1: 19903-25573 bp Neighborhood of RT #1 [19903, 25587] Avd_like RVT-DGRs RpsA HflB Feature: gene Location: 19903-20280 bp Feature: gene Location: 20700-20987 bp Ori: KKP59414.1 Feature: domain Description: Avd_like Location: 20706-20961 bp Feature: domain Description: Avd_like Location: 20706-20961 bp Feature: gene Location: 21003-22181 bp Ori: KKP59415.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 21315-22008 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 213 15-22008 bp Feature: gene Location: 22367-23569 bp Ori: KKP59416.1 Feature: domain Description: RpsA Location: 22400-23480 bp Feature: domain Description: RpsA Location: 22400-23 480 bp Feature: gene Location: 23743-25587 bp Ori: KKP59417.1 Feature: domain Description: HflB Location: 23794-25573 bp Feature: domain Description: HflB Location: 23 794-25573 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, RpsA (COG0539), HflB (COG0465)