myRT

myRT report for GCA_000990515.1_ASM99051v1

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Seq: LBQA01000005.1 Candidatus Moranbacteria bacterium GW2011_GWE1_35_17 UR66_C0005, whole genome shotgun sequence (82872 bp)
Overview 1 RT 1: 79251-82872 bp Neighborhood of RT #1 [79251, 82872] RVT-Retrons Feature: gene Location: 79251-79775 bp Feature: gene Location: 80125-80343 bp Feature: gene Location: 80731-81774 bp Ori: KKP68543.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 80854-81478 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 80854-81 478 bp Feature: gene Location: 82278-82727 bp Feature: gene Location: 82794-82872 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons

Seq: LBQA01000003.1 Candidatus Moranbacteria bacterium GW2011_GWE1_35_17 UR66_C0003, whole genome shotgun sequence (206948 bp)
Overview 1 RT 1: 17812-22858 bp Neighborhood of RT #1 [17812, 22858] DUF4446 WD40 WD40 RVT-DGRs Avd_like Feature: gene Location: 17812-18315 bp Ori: KKP68754.1 Feature: domain Description: DUF4446 Location: 17848-18286 bp Feature: domain Description: DUF4446 Location: 17848-182 86 bp Feature: gene Location: 18323-19762 bp Ori: KKP68755.1 Feature: domain Description: WD40 Location: 18509-19193 bp Feature: domain Description: WD40 Location: 18509-19193 bp Feature: domain Description: WD40 Location: 19292-19706 bp Feature: domain Description: WD40 Location: 192 92 -19706 bp Feature: gene Location: 19911-20978 bp Ori: KKP68756.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 20172-20775 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 2 0172 -2 0775 bp Feature: gene Location: 21060-21317 bp Ori: KKP68757.1 Feature: domain Description: Avd_like Location: 21090-21297 bp Feature: domain Description: Avd_like Location: 2 1090-2 12 97 bp Feature: gene Location: 21752-22858 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF4446 (pfam14584), WD40 (smart00320), RVT-DGRs, Avd_like (cd16376)

Seq: LBQA01000012.1 Candidatus Moranbacteria bacterium GW2011_GWE1_35_17 UR66_C0012, whole genome shotgun sequence (55143 bp)
Overview 1 RT 1: 35657-43443 bp 2 RT 2: 50051-55078 bp Neighborhood of RT #1 [35657, 43484] DUF1566 Avd_like RVT-DGRs TIGR02436 4helix_suffix Laminin_G_3 Laminin_G_3 Neighborhood of RT #2 [50051, 55143] TIGR02436 Avd_like RVT-DGRs Laminin_G_3 Laminin_G_3 Feature: gene Location: 35657-36313 bp Ori: KKP67654.1 Feature: domain Description: DUF1566 Location: 36092-36305 bp Feature: domain Description: DUF1566 Location: 3 6092-3 63 05 bp Feature: gene Location: 36737-37144 bp Ori: KKP67655.1 Feature: domain Description: Avd_like Location: 36764-37079 bp Feature: domain Description: Avd_like Location: 3 6764-3 7079 bp Feature: gene Location: 37125-38210 bp Ori: KKP67656.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 37323-38043 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3 73 23 -3 8043 bp Feature: gene Location: 38295-38858 bp Ori: KKP67657.1 Feature: domain Description: TIGR02436 Location: 38334-38529 bp Feature: domain Description: TIGR0243 6 Location: 3 83 3 4-3 8529 bp Feature: domain Description: 4helix_suffix Location: 38709-38850 bp Feature: domain Description: 4helix_suffix Location: 3 8709-3 8850 bp Feature: gene Location: 38931-43484 bp Ori: KKP67658.1 Feature: domain Description: Laminin_G_3 Location: 42339-42801 bp Feature: domain Description: Laminin_G_3 Location: 423 3 9-42801 bp Feature: domain Description: Laminin_G_3 Location: 43062-43443 bp Feature: domain Description: Laminin_G_3 Location: 43 062-43 443 bp Feature: gene Location: 50051-50437 bp Ori: KKP67665.1 Feature: domain Description: TIGR02436 Location: 50102-50420 bp Feature: domain Description: TIGR0243 6 Location: 50102-50420 bp Feature: gene Location: 50514-50873 bp Ori: KKP67666.1 Feature: domain Description: Avd_like Location: 50541-50847 bp Feature: domain Description: Avd_like Location: 50541-50847 bp Feature: gene Location: 51278-52450 bp Ori: KKP67667.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 51476-52145 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 51476-52145 bp Feature: gene Location: 52560-53276 bp Feature: gene Location: 53281-55143 bp Ori: KKP67669.1 Feature: domain Description: Laminin_G_3 Location: 53938-54421 bp Feature: domain Description: Laminin_G_3 Location: 53 93 8-54421 bp Feature: domain Description: Laminin_G_3 Location: 54664-55078 bp Feature: domain Description: Laminin_G_3 Location: 54664-55078 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs, TIGR02436 (four helix bundle protein), 4helix_suffix (TIGR04258), Laminin_G_3 (pfam13385)