myRT

myRT report for GCA_001000265.1_ASM100026v1

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Seq: LCHE01000003.1 Candidatus Yanofskybacteria bacterium GW2011_GWA2_44_10 UW14_C0003, whole genome shotgun sequence (25567 bp)
Overview 1 RT 1: 5517-10580 bp Neighborhood of RT #1 [5517, 10580] PinE Zn_ribbon_recom RVT-DGRs Avd_like Feature: gene Location: 5517-6230 bp Feature: gene Location: 6202-7389 bp Ori: KKT28760.1 Feature: domain Description: PinE Location: 6217-6676 bp Feature: domain Description: PinE Location: 621 7-6676 bp Feature: domain Description: Zn_ribbon_recom Location: 6946-7123 bp Feature: domain Description: Zn_ribbon_recom Location: 6946-71 23 bp Feature: gene Location: 7781-8833 bp Ori: KKT28761.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 7988-8618 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 7988-861 8 bp Feature: gene Location: 8855-9202 bp Ori: KKT28762.1 Feature: domain Description: Avd_like Location: 8870-9185 bp Feature: domain Description: Avd_like Location: 8870-91 85 bp Feature: gene Location: 9753-10580 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PinE (COG1961), Zn_ribbon_recom (pfam13408), RVT-DGRs, Avd_like (cd16376)

Seq: LCHE01000008.1 Candidatus Yanofskybacteria bacterium GW2011_GWA2_44_10 UW14_C0008, whole genome shotgun sequence (51806 bp)
Overview 1 RT 1: 42979-50897 bp Neighborhood of RT #1 [42979, 51301] rpoB PRK00566 RVT-Retrons Feature: gene Location: 42979-46134 bp Ori: KKT28452.1 Feature: domain Description: rpoB Location: 42988-46129 bp Feature: domain Description: rpoB Location: 42 988-4612 9 bp Feature: gene Location: 46334-49867 bp Ori: KKT28453.1 Feature: domain Description: PRK00566 Location: 46340-49829 bp Feature: domain Description: PRK00566 Location: 46340-4982 9 bp Feature: gene Location: 49988-51301 bp Ori: KKT28454.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50306-50897 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 50306-50897 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT rpoB (TIGR02013), PRK00566 (DNA-directed RNA polymerase subunit beta'; Provisional), RVT-Retrons

Seq: LCHE01000013.1 Candidatus Yanofskybacteria bacterium GW2011_GWA2_44_10 UW14_C0013, whole genome shotgun sequence (27628 bp)
Overview 1 RT 1: 7642-12034 bp Neighborhood of RT #1 [7642, 12034] DegQ Mpg Mpg RVT-DGRs Avd_like Feature: gene Location: 7642-8685 bp Ori: KKT28161.1 Feature: domain Description: DegQ Location: 7675-8677 bp Feature: domain Description: DegQ Location: 7675-8677 bp Feature: gene Location: 8697-9191 bp Ori: KKT28162.1 Feature: domain Description: Mpg Location: 8703-9006 bp Feature: domain Description: Mpg Location: 8703 -9006 bp Feature: domain Description: Mpg Location: 9006-9189 bp Feature: domain Description: Mpg Location: 9006-9189 bp Feature: gene Location: 9216-10241 bp Ori: KKT28163.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 9426-10056 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 9426-10056 bp Feature: gene Location: 10245-10595 bp Ori: KKT28164.1 Feature: domain Description: Avd_like Location: 10269-10584 bp Feature: domain Description: Avd_like Location: 10269-10584 bp Feature: gene Location: 11174-12034 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DegQ (pfam08181), Mpg (COG2094), RVT-DGRs, Avd_like (cd16376)