myRT

myRT report for GCA_001004435.1_ASM100443v1

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Seq: LCRC01000045.1 Parcubacteria group bacterium GW2011_GWB1_52_7 UY71_C0045, whole genome shotgun sequence (5918 bp)
Overview 1 RT 1: 1-2797 bp Neighborhood of RT #1 [1, 2797] RVT-DGRs Feature: gene Location: 1-321 bp Feature: gene Location: 337-1320 bp Ori: KKW27396.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 550-1162 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 550-1 1 62 bp Feature: gene Location: 1292-1636 bp Feature: gene Location: 2084-2797 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-DGRs

Seq: LCRC01000006.1 Parcubacteria group bacterium GW2011_GWB1_52_7 UY71_C0006, whole genome shotgun sequence (51233 bp)
Overview 1 RT 1: 7074-12185 bp Neighborhood of RT #1 [7074, 12226] NUDIX PRK05298 RVT-Retrons ruvA HTH_ARSR Feature: gene Location: 7074-7697 bp Ori: KKW28973.1 Feature: domain Description: NUDIX Location: 7290-7602 bp Feature: domain Description: NUDIX Location: 72 90-7602 bp Feature: gene Location: 7694-9679 bp Ori: KKW28974.1 Feature: domain Description: PRK05298 Location: 7700-9662 bp Feature: domain Description: PRK052 98 Location: 7700-9662 bp Feature: gene Location: 10153-11133 bp Ori: KKW28975.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10318-10873 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 10318-10873 bp Feature: gene Location: 11192-11776 bp Ori: KKW28976.1 Feature: domain Description: ruvA Location: 11195-11762 bp Feature: domain Description: ruvA Location: 11195-11762 bp Feature: gene Location: 11960-12226 bp Ori: KKW28977.1 Feature: domain Description: HTH_ARSR Location: 11990-12185 bp Feature: domain Description: HTH_ARSR Location: 11990-12 185 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NUDIX (pfam00293), PRK05298 (excinuclease ABC subunit UvrB), RVT-Retrons, ruvA (TIGR00084), HTH_ARSR (smart00418)

Seq: LCRC01000018.1 Parcubacteria group bacterium GW2011_GWB1_52_7 UY71_C0018, whole genome shotgun sequence (17140 bp)
Overview 1 RT 1: 245-7822 bp Neighborhood of RT #1 [245, 7824] PRK12267 TatD_DNAse RVT-Retrons leuS leuS Feature: gene Location: 245-1693 bp Ori: KKW28570.1 Feature: domain Description: PRK12267 Location: 257-1691 bp Feature: domain Description: PRK12267 Location: 257-1691 bp Feature: gene Location: 1875-2705 bp Ori: KKW28571.1 Feature: domain Description: TatD_DNAse Location: 1893-2700 bp Feature: domain Description: TatD_DNAse Location: 1893 -2700 bp Feature: gene Location: 3243-4466 bp Ori: KKW28572.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3423-4053 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 3 423 -4053 bp Feature: gene Location: 4562-5005 bp Feature: gene Location: 5101-7824 bp Ori: KKW28574.1 Feature: domain Description: leuS Location: 5104-6277 bp Feature: domain Description: leuS Location: 5104-6277 bp Feature: domain Description: leuS Location: 6574-7822 bp Feature: domain Description: leuS Location: 6574-7822 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK12267 (methionyl-tRNA synthetase; Reviewed), TatD_DNAse (cd01310), RVT-Retrons, leuS (PRK12300)