myRT

myRT report for GCA_001004515.1_ASM100451v1

Download annotations/find similar RTs

Seq: LCRG01000001.1 Parcubacteria group bacterium GW2011_GWC2_52_8c UY75_C0001, whole genome shotgun sequence (26398 bp)
Overview 1 RT 1: 10804-16171 bp Neighborhood of RT #1 [10804, 16212] NUDIX PRK05298 RVT-Retrons ruvA HTH_ARSR Feature: gene Location: 10804-11469 bp Ori: KKW31756.1 Feature: domain Description: NUDIX Location: 11104-11365 bp Feature: domain Description: NUDIX Location: 1 1 1 04-1 1 365 bp Feature: gene Location: 11458-13443 bp Ori: KKW31757.1 Feature: domain Description: PRK05298 Location: 11464-13426 bp Feature: domain Description: PRK05298 Location: 1 1 464-1 3426 bp Feature: gene Location: 14160-15119 bp Ori: KKW31758.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 14304-14859 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 1 4304-1 4859 bp Feature: gene Location: 15178-15762 bp Ori: KKW31759.1 Feature: domain Description: ruvA Location: 15181-15748 bp Feature: domain Description: ruvA Location: 1 51 81 -1 5748 bp Feature: gene Location: 15946-16212 bp Ori: KKW31760.1 Feature: domain Description: HTH_ARSR Location: 15976-16171 bp Feature: domain Description: HTH_ARSR Location: 1 5976-1 61 71 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT NUDIX (pfam00293), PRK05298 (excinuclease ABC subunit UvrB), RVT-Retrons, ruvA (TIGR00084), HTH_ARSR (smart00418)

Seq: LCRG01000028.1 Parcubacteria group bacterium GW2011_GWC2_52_8c UY75_C0028, whole genome shotgun sequence (6895 bp)
Overview 1 RT 1: 238-4829 bp Neighborhood of RT #1 [238, 4831] RVT-Retrons leuS leuS Feature: gene Location: 238-1461 bp Ori: KKW30593.1 Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 418-1048 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 418-1048 bp Feature: gene Location: 1458-1961 bp Feature: gene Location: 2057-4831 bp Ori: KKW30595.1 Feature: domain Description: leuS Location: 2060-3233 bp Feature: domain Description: leuS Location: 2 060-32 33 bp Feature: domain Description: leuS Location: 3530-4829 bp Feature: domain Description: leuS Location: 3530-482 9 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-Retrons, leuS (PRK12300)