myRT

myRT report for GCA_001006805.1_Microvirga_massiliensis_JC119

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Seq: LN811366.1 Microvirga sp. JC119 genome assembly Microvirga massiliensis JC119, scaffold scaffold00017, whole genome shotgun sequence (207573 bp)
Overview 1 RT 1: 174151-179376 bp Neighborhood of RT #1 [174151, 179477] DUF3387 DUF3387 RVT-UG11 AcyC TolBN TPR TPR TPR Feature: gene Location: 174151-174360 bp Feature: domain Description: DUF3387 Location: 174157-174355 bp Feature: domain Description: DUF3387 Location: 1 741 57-1 74355 bp Feature: gene Location: 174427-174717 bp Feature: domain Description: DUF3387 Location: 174430-174679 bp Feature: domain Description: DUF3387 Location: 1 74430-1 74679 bp Feature: gene Location: 174945-175679 bp Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 175068-175509 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 1 75068-1 75509 bp Feature: gene Location: 176383-176805 bp Feature: gene Location: 177507-179477 bp Feature: domain Description: AcyC Location: 177528-178056 bp Feature: domain Description: AcyC Location: 1 77528-1 78056 bp Feature: domain Description: TolBN Location: 178218-178644 bp Feature: domain Description: TolBN Location: 1 7821 8-1 78644 bp Feature: domain Description: TPR Location: 178755-178848 bp Feature: domain Description: TPR Location: 1 78755-1 78848 bp Feature: domain Description: TPR Location: 178890-179136 bp Feature: domain Description: TPR Location: 1 78890-1 791 36 bp Feature: domain Description: TPR Location: 179181-179376 bp Feature: domain Description: TPR Location: 1 791 81 -1 79376 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF3387 (pfam11867), RVT-UG11, AcyC (COG2114), TolBN (COG5616), TPR (smart00028)

Seq: LN811370.1 Microvirga sp. JC119 genome assembly Microvirga massiliensis JC119, scaffold scaffold00021, whole genome shotgun sequence (111535 bp)
Overview 1 RT 1: 23028-27366 bp Neighborhood of RT #1 [23028, 27366] RRXRR HNH_5 RVT-GII Intron_maturas2 HNHc Feature: gene Location: 23028-23237 bp Feature: gene Location: 23297-24778 bp Feature: domain Description: RRXRR Location: 23495-24026 bp Feature: domain Description: RRXRR Location: 2 3495-2 402 6 bp Feature: domain Description: HNH_5 Location: 24083-24233 bp Feature: domain Description: HNH_5 Location: 2 4083-2 42 33 bp Feature: gene Location: 24870-26714 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 25137-25941 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 5137-2 5941 bp Feature: domain Description: Intron_maturas2 Location: 26043-26358 bp Feature: domain Description: Intron_maturas2 Location: 2 6043-2 6358 bp Feature: domain Description: HNHc Note: nucleases Location: 26508-26649 bp Feature: domain Description: HNHc Note: nucleases Location: 2 6508-2 6649 bp Feature: gene Location: 26701-27165 bp Feature: gene Location: 27220-27366 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RRXRR (pfam14239), HNH_5 (pfam14279), RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)