myRT

myRT report for GCA_001008135.1_ASM100813v1

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Seq: LBNW01000183.1 Streptomyces stelliscabiei strain NRRL B-24447 B24447_contig_183, whole genome shotgun sequence (89266 bp)
Overview 1 RT 1: 14976-19140 bp Neighborhood of RT #1 [14976, 19140] HTH_Tnp_1 Tra5 RVT-GII GIIM COG3464 Feature: gene Location: 14976-15359 bp Feature: domain Description: HTH_Tnp_1 Location: 15024-15261 bp Feature: domain Description: HTH_Tnp_1 Location: 1 5024-1 5261 bp Feature: gene Location: 15377-16384 bp Feature: domain Description: Tra5 Location: 15428-16217 bp Feature: domain Description: Tra5 Location: 1 5428-1 621 7 bp Feature: gene Location: 17059-18447 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 17323-18019 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 7323-1 801 9 bp Feature: domain Description: GIIM Note: maturase Location: 18091-18310 bp Feature: domain Description: GIIM Note: maturase Location: 1 8091 -1 831 0 bp Feature: gene Location: 18800-18955 bp Feature: domain Description: COG3464 Location: 18812-18926 bp Feature: domain Description: COG3464 Location: 1 881 2-1 8926 bp Feature: gene Location: 18952-19140 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_Tnp_1 (pfam01527), Tra5 (COG2801), RVT-GII, GIIM (pfam08388), COG3464 (Transposase )

Seq: LBNW01000283.1 Streptomyces stelliscabiei strain NRRL B-24447 B24447_contig_283, whole genome shotgun sequence (42495 bp)
Overview 1 RT 1: 289-6123 bp Neighborhood of RT #1 [289, 6123] GlpR TBP_aldolase_IIB RVT-GII Feature: gene Location: 289-1080 bp Feature: domain Description: GlpR Location: 304-1075 bp Feature: domain Description: GlpR Location: 304-1075 bp Feature: gene Location: 1289-2122 bp Feature: domain Description: TBP_aldolase_IIB Location: 1310-2117 bp Feature: domain Description: TBP_aldolase_IIB Location: 1310-2 117 bp Feature: gene Location: 3825-5102 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4176-4863 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4176-4863 bp Feature: gene Location: 5105-5296 bp Feature: gene Location: 5992-6123 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII