myRT

myRT report for GCA_001008335.2_ASM100833v2

Download annotations/find similar RTs

Seq: CP028370.1 Leptospira santarosai strain U164 chromosome I (3730310 bp)
Overview 1 RT 1: 523264-530022 bp 2 RT 2: 650701-657831 bp Neighborhood of RT #1 [523264, 530022] HisKA_7TM RVT-GII GIIM Rhs_assc_core Neighborhood of RT #2 [650701, 658034] RVT-UG28b Phage_integrase HEPN_Apea Feature: gene Location: 523264-524196 bp Ori: AVV49138.1 Feature: domain Description: HisKA_7TM Location: 523309-523957 bp Feature: domain Description: HisKA_7TM Location: 523309-523957 bp Feature: gene Location: 524204-524872 bp Feature: gene Location: 525753-527150 bp Ori: AVV49140.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 526107-526764 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 5261 07-526764 bp Feature: domain Description: GIIM Note: maturase Location: 526848-527076 bp Feature: domain Description: GIIM Note: maturase Location: 526848-527076 bp Feature: gene Location: 527530-528381 bp Ori: AVV49141.1 Feature: domain Description: Rhs_assc_core Location: 527635-527875 bp Feature: domain Description: Rhs_assc_core Location: 527635-527875 bp Feature: gene Location: 529555-530022 bp Feature: gene Location: 650701-651741 bp Feature: gene Location: 652394-653461 bp Feature: gene Location: 653544-655343 bp Ori: AVV49244.1 Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 654021-654735 bp Feature: RT Description: RVT-UG28b Note: UG28b RT Location: 654021 -654735 bp Feature: gene Location: 656087-656656 bp Ori: AVV49245.1 Feature: domain Description: Phage_integrase Location: 656105-656615 bp Feature: domain Description: Phage_integrase Location: 6561 05-65661 5 bp Feature: gene Location: 656634-658034 bp Ori: AVV49246.1 Feature: domain Description: HEPN_Apea Location: 657567-657831 bp Feature: domain Description: HEPN_Apea Location: 657567-657831 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HisKA_7TM (pfam16927), RVT-GII, GIIM (pfam08388), Rhs_assc_core (TIGR03696), RVT-UG28b, Phage_integrase (pfam00589), HEPN_Apea (pfam18739)