myRT

myRT report for GCA_001010305.1_ASM101030v1

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Seq: BBXH01000012.1 Comamonas sp. E6 DNA, contig: CSE6012, whole genome shotgun sequence (196965 bp)
Overview 1 RT 1: 180033-185955 bp Neighborhood of RT #1 [180033, 185960] LPS_export_lptB LptA RVT_N RVT-GII GIIM HNH DsbA_DsbA FtsN FtsN Feature: gene Location: 180033-180815 bp Feature: domain Description: LPS_export_lptB Location: 180087-180813 bp Feature: domain Description: LPS_export_lptB Location: 1 80087-1 8081 3 bp Feature: gene Location: 180812-181579 bp Feature: domain Description: LptA Location: 180926-181502 bp Feature: domain Description: LptA Location: 1 80926-1 81 502 bp Feature: gene Location: 181591-183324 bp Feature: RT Description: RVT_N Location: 181648-181882 bp Feature: RT Description: RVT_N Location: 1 81 648-1 81 882 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 181939-182587 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 81 939-1 82587 bp Feature: domain Description: GIIM Note: maturase Location: 182641-182872 bp Feature: domain Description: GIIM Note: maturase Location: 1 82641 -1 82872 bp Feature: domain Description: HNH Note: nucleases Location: 183118-183253 bp Feature: domain Description: HNH Note: nucleases Location: 1 831 1 8-1 83253 bp Feature: gene Location: 184445-185095 bp Feature: domain Description: DsbA_DsbA Location: 184547-185087 bp Feature: domain Description: DsbA_DsbA Location: 1 84547-1 85087 bp Feature: gene Location: 185256-185960 bp Feature: domain Description: FtsN Location: 185268-185490 bp Feature: domain Description: FtsN Location: 1 85268-1 85490 bp Feature: domain Description: FtsN Location: 185571-185955 bp Feature: domain Description: FtsN Location: 1 85571 -1 85955 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT LPS_export_lptB (TIGR04406), LptA (COG1934), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), DsbA_DsbA (cd03019), FtsN (COG3087)

Seq: BBXH01000021.1 Comamonas sp. E6 DNA, contig: CSE6021, whole genome shotgun sequence (125570 bp)
Overview 1 RT 1: 95783-106015 bp Neighborhood of RT #1 [95783, 106035] PRK05579 RVT-GII GIIM HNH RVT_N RVT-GII GIIM HNH pyrG KdsA Feature: gene Location: 95783-96301 bp Feature: gene Location: 96325-97551 bp Feature: domain Description: PRK05579 Location: 96340-97534 bp Feature: domain Description: PRK05579 Location: 96340-97534 bp Feature: gene Location: 99011-100330 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99014-99632 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 99014-99632 bp Feature: domain Description: GIIM Note: maturase Location: 99683-99917 bp Feature: domain Description: GIIM Note: maturase Location: 99683-99917 bp Feature: domain Description: HNH Note: nucleases Location: 100163-100298 bp Feature: domain Description: HNH Note: nucleases Location: 100163-1002 98 bp Feature: gene Location: 101505-103199 bp Feature: RT Description: RVT_N Location: 101562-101802 bp Feature: RT Description: RVT_N Location: 101562 -101802 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101853-102501 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 101853-102 501 bp Feature: domain Description: GIIM Note: maturase Location: 102555-102786 bp Feature: domain Description: GIIM Note: maturase Location: 102 555-102 786 bp Feature: domain Description: HNH Note: nucleases Location: 103032-103167 bp Feature: domain Description: HNH Note: nucleases Location: 103032 -103167 bp Feature: gene Location: 103367-105028 bp Feature: domain Description: pyrG Location: 103370-105008 bp Feature: domain Description: pyrG Location: 103370-105008 bp Feature: gene Location: 105151-106035 bp Feature: domain Description: KdsA Location: 105181-106015 bp Feature: domain Description: KdsA Location: 105181-106015 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), HNH (pfam01844), PRK05579 (bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated), pyrG (PRK05380), KdsA (COG2877)