myRT

myRT report for GCA_001010585.1_A.butzleri_L348_1.0

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Seq: JAIQ01000051.1 Arcobacter butzleri L348 isolate CHRB125 contig000051, whole genome shotgun sequence (33966 bp)
Overview 1 RT 1: 19294-28144 bp Neighborhood of RT #1 [19294, 28144] RVT-GII DUF4942 Feature: gene Location: 19294-21948 bp Feature: gene Location: 22849-22989 bp Feature: gene Location: 23048-24886 bp Ori: KLE01853.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23363-24059 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 23363-24059 bp Feature: gene Location: 24951-27668 bp Ori: KLE01854.1 Feature: domain Description: DUF4942 Location: 26178-26979 bp Feature: domain Description: DUF4942 Location: 261 78-26979 bp Feature: gene Location: 27773-28144 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, DUF4942 (pfam13708)

Seq: JAIQ01000034.1 Arcobacter butzleri L348 isolate CHRB125 contig000034, whole genome shotgun sequence (38438 bp)
Overview 1 RT 1: 3034-5349 bp 2 RT 2: 34236-37875 bp Neighborhood of RT #1 [3034, 5349] Avd_like RVT-DGRs Neighborhood of RT #2 [34236, 37934] Cas_Cmr5 Cmr6_III-B RVT-CRISPR Cas1_I-II-III Cas2_I_II_III Feature: gene Location: 3034-3438 bp Ori: KLE02154.1 Feature: domain Description: Avd_like Location: 3073-3415 bp Feature: domain Description: Avd_like Location: 3073-3415 bp Feature: gene Location: 3605-4600 bp Ori: KLE02155.1 Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3860-4445 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 3860-4445 bp Feature: gene Location: 4600-5097 bp Feature: gene Location: 5104-5349 bp Feature: gene Location: 34236-34595 bp Ori: KLE02183.1 Feature: domain Description: Cas_Cmr5 Location: 34308-34518 bp Feature: domain Description: Cas_Cmr5 Location: 34308-34518 bp Feature: gene Location: 34597-35424 bp Ori: KLE02184.1 Feature: domain Description: Cmr6_III-B Location: 34825-35404 bp Feature: domain Description: Cmr6_III-B Location: 3482 5-35404 bp Feature: gene Location: 35428-37659 bp Ori: KLE02185.1 Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 35629-36238 bp Feature: RT Description: RVT-CRISPR Note: CRISPR RT Location: 3562 9-362 38 bp Feature: domain Description: Cas1_I-II-III Location: 36703-37615 bp Feature: domain Description: Cas1_I-II-III Location: 36703-37615 bp Feature: gene Location: 37659-37934 bp Ori: KLE02186.1 Feature: domain Description: Cas2_I_II_III Location: 37671-37875 bp Feature: domain Description: Cas2 _I_II_III Location: 37671-37875 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Avd_like (cd16376), RVT-DGRs, Cas_Cmr5 (pfam09701), Cmr6_III-B (cd09661), RVT-CRISPR, Cas1_I-II-III (cl00656), Cas2_I_II_III (cl11442)