myRT

myRT report for GCA_001011975.1_ASM101197v1

Download annotations/find similar RTs

Seq: LDCL01000012.1 Enterobacter kobei strain GN02225 contig12, whole genome shotgun sequence (70224 bp)
Overview 1 RT 1: 61168-68147 bp Neighborhood of RT #1 [61168, 68147] PRK05658 PRK10201 RVT-UG11 L-Ala-D-Glu_peptidase_like Feature: gene Location: 61168-63012 bp Ori: KLG25273.1 Feature: domain Description: PRK05658 Location: 61174-63010 bp Feature: domain Description: PRK05658 Location: 61 1 74-6301 0 bp Feature: gene Location: 63539-64045 bp Ori: KLG25274.1 Feature: domain Description: PRK10201 Location: 63542-64040 bp Feature: domain Description: PRK1 0201 Location: 63542-64040 bp Feature: gene Location: 64439-65200 bp Ori: KLG25275.1 Feature: RT Description: RVT-UG11 Note: UG11 RT Location: 64565-65018 bp Feature: RT Description: RVT-UG1 1 Note: UG1 1 RT Location: 64565-6501 8 bp Feature: gene Location: 67075-67380 bp Ori: KLG25276.1 Feature: domain Description: L-Ala-D-Glu_peptidase_like Location: 67090-67360 bp Feature: domain Description: L-Ala-D-Glu_peptidase_like Location: 67090-67360 bp Feature: gene Location: 67926-68147 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK05658 (RNA polymerase sigma factor RpoD; Validated), PRK10201 (G/U mismatch-specific DNA glycosylase), RVT-UG11, L-Ala-D-Glu_peptidase_like (cd14845)

Seq: LDCL01000047.1 Enterobacter kobei strain GN02225 contig47, whole genome shotgun sequence (2598 bp)
Overview 1 RT 1: 95-1928 bp Neighborhood of RT #1 [95, 1975] RVT-GII Intron_maturas2 HNHc Feature: gene Location: 95-1975 bp Ori: KLG19903.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 383-1220 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 383-12 2 0 bp Feature: domain Description: Intron_maturas2 Location: 1334-1610 bp Feature: domain Description: Intron_maturas2 Location: 1334-1610 bp Feature: domain Description: HNHc Note: nucleases Location: 1751-1928 bp Feature: domain Description: HNHc Note: nucleases Location: 1751-192 8 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII, Intron_maturas2 (pfam01348), HNHc (smart00507)