myRT

myRT report for GCA_001016775.1_ASM101677v1

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Seq: LCVF01000022.1 Streptococcus agalactiae strain ES-PW-087 ctg7180000004518, whole genome shotgun sequence (304283 bp)
Overview 1 RT 1: 62209-68509 bp 2 RT 2: 105504-109331 bp Neighborhood of RT #1 [62209, 68509] RVT_N RVT-GII GIIM SR_TndX_transposase Recombinase Zn_ribbon_recom DUF4368 Neighborhood of RT #2 [105504, 109348] RVT-GII DUF3801 DUF3801 Feature: gene Location: 62209-62736 bp Feature: gene Location: 62789-64144 bp Feature: gene Location: 64278-65948 bp Ori: KLJ37105.1 Feature: domain Description: RVT_N Location: 64323-64566 bp Feature: domain Description: RVT_N Location: 64323-64566 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 64611-65259 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 6461 1 -65259 bp Feature: domain Description: GIIM Note: maturase Location: 65313-65544 bp Feature: domain Description: GIIM Note: maturase Location: 6531 3-65544 bp Feature: gene Location: 66650-68293 bp Ori: KLJ37106.1 Feature: domain Description: SR_TndX_transposase Location: 66707-67118 bp Feature: domain Description: SR_TndX_transposase Location: 66707-671 1 8 bp Feature: domain Description: Recombinase Location: 67223-67586 bp Feature: domain Description: Recombinase Location: 67223-67586 bp Feature: domain Description: Zn_ribbon_recom Location: 67625-67820 bp Feature: domain Description: Zn_ribbon_recom Location: 67625-67820 bp Feature: domain Description: DUF4368 Location: 68099-68288 bp Feature: domain Description: DUF4368 Location: 68099-68288 bp Feature: gene Location: 68348-68509 bp Feature: gene Location: 105504-107411 bp Ori: KLJ37139.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 105834-106578 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 05834-1 06578 bp Feature: gene Location: 107591-107770 bp Feature: gene Location: 108863-109348 bp Ori: KLJ37141.1 Feature: domain Description: DUF3801 Location: 108959-109223 bp Feature: domain Description: DUF3801 Location: 1 08959-1 09223 bp Feature: domain Description: DUF3801 Location: 109241-109331 bp Feature: domain Description: DUF3801 Location: 1 09241 -1 09331 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), SR_TndX_transposase (cd03770), Recombinase (pfam07508), Zn_ribbon_recom (pfam13408), DUF4368 (pfam14287), DUF3801 (pfam12687)

Seq: LCVF01000018.1 Streptococcus agalactiae strain ES-PW-087 ctg7180000004514, whole genome shotgun sequence (15543 bp)
Overview 1 RT 1: 1596-12462 bp Neighborhood of RT #1 [1596, 12530] UPF0236 Peptidases_S8_C5a_Peptidase fn3_5 CHU_C RVT-GII GIIM AdcA strep_his_triad strep_his_triad strep_his_triad Feature: gene Location: 1596-2861 bp Ori: KLJ37605.1 Feature: domain Description: UPF0236 Location: 1626-2754 bp Feature: domain Description: UPF02 36 Location: 162 6-2 754 bp Feature: gene Location: 3584-7036 bp Ori: KLJ37606.1 Feature: domain Description: Peptidases_S8_C5a_Peptidase Location: 3929-5327 bp Feature: domain Description: Peptidases_S8_C5a_Peptidase Location: 392 9-532 7 bp Feature: domain Description: fn3_5 Location: 5375-5705 bp Feature: domain Description: fn3_5 Location: 5375-5705 bp Feature: domain Description: CHU_C Location: 6041-6335 bp Feature: domain Description: CHU_C Location: 6041-6335 bp Feature: gene Location: 7618-8895 bp Ori: KLJ37607.1 Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7822-8437 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 782 2 -8437 bp Feature: domain Description: GIIM Note: maturase Location: 8491-8707 bp Feature: domain Description: GIIM Note: maturase Location: 8491-8707 bp Feature: gene Location: 9129-10049 bp Ori: KLJ37608.1 Feature: domain Description: AdcA Location: 9222-10047 bp Feature: domain Description: AdcA Location: 92 2 2 -10047 bp Feature: gene Location: 10062-12530 bp Ori: KLJ37609.1 Feature: domain Description: strep_his_triad Location: 10068-11181 bp Feature: domain Description: strep_his_triad Location: 10068-11181 bp Feature: domain Description: strep_his_triad Location: 11319-11853 bp Feature: domain Description: strep_his_triad Location: 11319-11853 bp Feature: domain Description: strep_his_triad Location: 12018-12462 bp Feature: domain Description: strep_his_triad Location: 12 018-12 462 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UPF0236 (pfam06782), Peptidases_S8_C5a_Peptidase (cd07475), fn3_5 (pfam06280), CHU_C (pfam13585), RVT-GII, GIIM (pfam08388), AdcA (cd01017), strep_his_triad (TIGR01363)