myRT

myRT report for GCA_001017925.1_ASM101792v1

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Seq: LBKF01000032.1 Streptococcus agalactiae strain DK-B-USS-032 ctg7180000001294, whole genome shotgun sequence (13230 bp)
Overview 1 RT 1: 2361-12930 bp Neighborhood of RT #1 [2361, 12998] UPF0236 Peptidases_S8_C5a_Peptidase fn3_5 CHU_C RVT-GII GIIM AdcA strep_his_triad strep_his_triad strep_his_triad Feature: gene Location: 2361-3398 bp Feature: domain Description: UPF0236 Location: 2415-3231 bp Feature: domain Description: UPF0236 Location: 241 5-3231 bp Feature: gene Location: 4053-7325 bp Feature: domain Description: Peptidases_S8_C5a_Peptidase Location: 4398-5796 bp Feature: domain Description: Peptidases_S8_C5a_Peptidase Location: 4398-5796 bp Feature: domain Description: fn3_5 Location: 5844-6174 bp Feature: domain Description: fn3_5 Location: 5844-61 74 bp Feature: domain Description: CHU_C Location: 6510-6804 bp Feature: domain Description: CHU_C Location: 651 0-6804 bp Feature: gene Location: 8086-9363 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8290-8905 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 8290-8905 bp Feature: domain Description: GIIM Note: maturase Location: 8959-9175 bp Feature: domain Description: GIIM Note: maturase Location: 8959-91 75 bp Feature: gene Location: 9597-10517 bp Feature: domain Description: AdcA Location: 9690-10515 bp Feature: domain Description: AdcA Location: 9690-1 051 5 bp Feature: gene Location: 10530-12998 bp Feature: domain Description: strep_his_triad Location: 10536-11649 bp Feature: domain Description: strep_his_triad Location: 1 0536-1 1 649 bp Feature: domain Description: strep_his_triad Location: 11787-12318 bp Feature: domain Description: strep_his_triad Location: 1 1 787-1 231 8 bp Feature: domain Description: strep_his_triad Location: 12486-12930 bp Feature: domain Description: strep_his_triad Location: 1 2486-1 2930 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT UPF0236 (pfam06782), Peptidases_S8_C5a_Peptidase (cd07475), fn3_5 (pfam06280), CHU_C (pfam13585), RVT-GII, GIIM (pfam08388), AdcA (cd01017)

Seq: LBKF01000026.1 Streptococcus agalactiae strain DK-B-USS-032 ctg7180000001288, whole genome shotgun sequence (197383 bp)
Overview 1 RT 1: 168496-178624 bp Neighborhood of RT #1 [168496, 178624] N6_Mtase COG4646 KOG0390 RVT_N RVT-GII GIIM Feature: gene Location: 168496-169047 bp Feature: gene Location: 169098-175094 bp Feature: domain Description: N6_Mtase Location: 171108-171699 bp Feature: domain Description: N6_Mtase Location: 171108-171699 bp Feature: domain Description: COG4646 Location: 172290-174597 bp Feature: domain Description: COG4646 Location: 172 2 90-174597 bp Feature: domain Description: KOG0390 Location: 174867-175065 bp Feature: domain Description: KOG0390 Location: 174867-175065 bp Feature: gene Location: 175654-177312 bp Feature: RT Description: RVT_N Location: 175699-175942 bp Feature: RT Description: RVT_N Location: 175699-175942 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 175987-176635 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 175987-176635 bp Feature: domain Description: GIIM Note: maturase Location: 176692-176920 bp Feature: domain Description: GIIM Note: maturase Location: 176692 -17692 0 bp Feature: gene Location: 177446-178255 bp Feature: gene Location: 178325-178624 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), KOG0390 (KOG0390, DNA repair protein, SNF2 family ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)