myRT

myRT report for GCA_001017935.1_ASM101793v1

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Seq: LBKG01000021.1 Streptococcus agalactiae strain DK-B-USS-055 ctg7180000001823, whole genome shotgun sequence (191113 bp)
Overview 1 RT 1: 89160-99231 bp Neighborhood of RT #1 [89160, 99231] N6_Mtase COG4646 KOG0390 RVT_N RVT-GII GIIM Feature: gene Location: 89160-89654 bp Feature: gene Location: 89704-95700 bp Feature: domain Description: N6_Mtase Location: 91717-92305 bp Feature: domain Description: N6_Mtase Location: 91 71 7-92305 bp Feature: domain Description: COG4646 Location: 92899-95203 bp Feature: domain Description: COG4646 Location: 92899-95203 bp Feature: domain Description: KOG0390 Location: 95473-95671 bp Feature: domain Description: KOG0390 Location: 95473-95671 bp Feature: gene Location: 96260-97918 bp Feature: RT Description: RVT_N Location: 96305-96548 bp Feature: RT Description: RVT_N Location: 96305-96548 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96593-97241 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 96593-97241 bp Feature: domain Description: GIIM Note: maturase Location: 97298-97526 bp Feature: domain Description: GIIM Note: maturase Location: 97298-97526 bp Feature: gene Location: 98052-98861 bp Feature: gene Location: 98932-99231 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), KOG0390 (KOG0390, DNA repair protein, SNF2 family ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: LBKG01000017.1 Streptococcus agalactiae strain DK-B-USS-055 ctg7180000001819, whole genome shotgun sequence (506725 bp)
Overview 1 RT 1: 222323-226533 bp Neighborhood of RT #1 [222323, 226535] EcCorA_ZntB-like_u2 rpsR RVT-GII GIIM PRK07275 rpsF Feature: gene Location: 222323-223267 bp Feature: domain Description: EcCorA_ZntB-like_u2 Location: 222392-223265 bp Feature: domain Description: EcCorA_ZntB-like_u2 Location: 2 2 2 392 -2 2 32 65 bp Feature: gene Location: 223437-223676 bp Feature: domain Description: rpsR Location: 223446-223671 bp Feature: domain Description: rpsR Location: 2 2 3446-2 2 3671 bp Feature: gene Location: 223845-225164 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 224145-224778 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 2 4145-2 2 4778 bp Feature: domain Description: GIIM Note: maturase Location: 224847-225069 bp Feature: domain Description: GIIM Note: maturase Location: 2 2 4847-2 2 5069 bp Feature: gene Location: 225745-226236 bp Feature: domain Description: PRK07275 Location: 225748-226234 bp Feature: domain Description: PRK072 75 Location: 2 2 5748-2 2 62 34 bp Feature: gene Location: 226248-226535 bp Feature: domain Description: rpsF Location: 226251-226533 bp Feature: domain Description: rpsF Location: 2 2 62 51-2 2 6533 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT EcCorA_ZntB-like_u2 (cd12827), rpsR (PRK00391), RVT-GII, GIIM (pfam08388), PRK07275 (single-stranded DNA-binding protein; Provisional), rpsF (PRK14074)