myRT

myRT report for GCA_001017975.1_ASM101797v1

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Seq: LBKH01000015.1 Streptococcus agalactiae strain DK-B-USS-147 ctg7180000003988, whole genome shotgun sequence (19526 bp)
Overview 1 RT 1: 10598-19020 bp Neighborhood of RT #1 [10598, 19412] N6_Mtase COG4646 KOG0390 RVT_N RVT-GII GIIM Feature: gene Location: 10598-11149 bp Feature: gene Location: 11198-17194 bp Feature: domain Description: N6_Mtase Location: 13211-13802 bp Feature: domain Description: N6_Mtase Location: 1 321 1 -1 3802 bp Feature: domain Description: COG4646 Location: 14393-16697 bp Feature: domain Description: COG4646 Location: 1 4393-1 6697 bp Feature: domain Description: KOG0390 Location: 16964-17165 bp Feature: domain Description: KOG0390 Location: 1 6964-1 71 65 bp Feature: gene Location: 17754-19412 bp Feature: RT Description: RVT_N Location: 17799-18042 bp Feature: RT Description: RVT_N Location: 1 7799-1 8042 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 18087-18735 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 1 8087-1 8735 bp Feature: domain Description: GIIM Note: maturase Location: 18792-19020 bp Feature: domain Description: GIIM Note: maturase Location: 1 8792-1 9020 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT N6_Mtase (pfam02384), COG4646 (Adenine-specific DNA methylase, N12 class ), KOG0390 (KOG0390, DNA repair protein, SNF2 family ), RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: LBKH01000089.1 Streptococcus agalactiae strain DK-B-USS-147 ctg7180000004062, whole genome shotgun sequence (22221 bp)
Overview 1 RT 1: 18462-22190 bp Neighborhood of RT #1 [18462, 22207] RVT_N RVT-GII GIIM KOG1000 Feature: gene Location: 18462-18761 bp Feature: gene Location: 18831-19640 bp Feature: gene Location: 19774-21432 bp Feature: RT Description: RVT_N Location: 19819-20062 bp Feature: RT Description: RVT_N Location: 19819-2 0062 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 20107-20755 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 2 0107-2 0755 bp Feature: domain Description: GIIM Note: maturase Location: 20812-21040 bp Feature: domain Description: GIIM Note: maturase Location: 2 0812 -2 1040 bp Feature: gene Location: 21992-22207 bp Feature: domain Description: KOG1000 Location: 22001-22190 bp Feature: domain Description: KOG1000 Location: 2 2 001-2 2 190 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), KOG1000 (KOG1000, Chromatin remodeling protein HARP/SMARCAL1, DEAD-box superfamily )

Seq: LBKH01000060.1 Streptococcus agalactiae strain DK-B-USS-147 ctg7180000004033, whole genome shotgun sequence (31997 bp)
Overview 1 RT 1: 28682-31997 bp Neighborhood of RT #1 [28682, 31997] COG4684 PGM2 RVT-GII Feature: gene Location: 28682-29254 bp Feature: domain Description: COG4684 Location: 28685-29249 bp Feature: domain Description: COG4684 Location: 28685-29249 bp Feature: gene Location: 29364-31082 bp Feature: domain Description: PGM2 Location: 29481-31056 bp Feature: domain Description: PGM2 Location: 29481-3 1056 bp Feature: gene Location: 31634-31997 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 31838-31997 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 183 8-3 1997 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4684 (Uncharacterized membrane protein ), PGM2 (cd05799), RVT-GII

Seq: LBKH01000013.1 Streptococcus agalactiae strain DK-B-USS-147 ctg7180000003986, whole genome shotgun sequence (5893 bp)
Overview 1 RT 1: 115-5864 bp Neighborhood of RT #1 [115, 5893] RVT_N RVT-GII GIIM COG4646 KOG0390 Feature: gene Location: 115-1773 bp Feature: RT Description: RVT_N Location: 160-403 bp Feature: RT Description: RVT_N Location: 160-4 03 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 448-1096 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 4 4 8-1096 bp Feature: domain Description: GIIM Note: maturase Location: 1153-1381 bp Feature: domain Description: GIIM Note: maturase Location: 1153-1381 bp Feature: gene Location: 2333-5893 bp Feature: domain Description: COG4646 Location: 3089-5396 bp Feature: domain Description: COG4 64 6 Location: 3089-5396 bp Feature: domain Description: KOG0390 Location: 5663-5864 bp Feature: domain Description: KOG0390 Location: 5663-5864 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388), COG4646 (Adenine-specific DNA methylase, N12 class ), KOG0390 (KOG0390, DNA repair protein, SNF2 family )

Seq: LBKH01000052.1 Streptococcus agalactiae strain DK-B-USS-147 ctg7180000004025, whole genome shotgun sequence (37885 bp)
Overview 1 RT 1: 35789-37885 bp Neighborhood of RT #1 [35789, 37885] miaA DUF3042 RVT-GII Feature: gene Location: 35789-36679 bp Feature: domain Description: miaA Location: 35795-36662 bp Feature: domain Description: miaA Location: 35 795 -36662 bp Feature: gene Location: 36790-36966 bp Feature: domain Description: DUF3042 Location: 36808-36961 bp Feature: domain Description: DUF3042 Location: 36808-36961 bp Feature: gene Location: 37522-37885 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37726-37885 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37726-37885 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT miaA (TIGR00174), DUF3042 (pfam11240), RVT-GII

Seq: LBKH01000058.1 Streptococcus agalactiae strain DK-B-USS-147 ctg7180000004031, whole genome shotgun sequence (53134 bp)
Overview 1 RT 1: 1-5499 bp Neighborhood of RT #1 [1, 5501] RVT-GII HepA Der Feature: gene Location: 1-364 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 205-364 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 205-36 4 bp Feature: gene Location: 937-4035 bp Feature: domain Description: HepA Location: 2335-4027 bp Feature: domain Description: HepA Location: 2335-4027 bp Feature: gene Location: 4191-5501 bp Feature: domain Description: Der Location: 4194-5499 bp Feature: domain Description: Der Location: 4194-5499 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT-GII