myRT

myRT report for GCA_001018575.1_ASM101857v1

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Seq: LBHI01000032.1 Streptococcus agalactiae strain DK-B-USS-146 ctg7180000003617, whole genome shotgun sequence (32292 bp)
Overview 1 RT 1: 28866-32289 bp Neighborhood of RT #1 [28866, 32292] COG4684 PGM2 RVT-GII Feature: gene Location: 28866-29438 bp Feature: domain Description: COG4684 Location: 28869-29433 bp Feature: domain Description: COG4684 Location: 28869-29433 bp Feature: gene Location: 29548-31266 bp Feature: domain Description: PGM2 Location: 29665-31240 bp Feature: domain Description: PGM2 Location: 29665-31 240 bp Feature: gene Location: 31818-32292 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32022-32289 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 32022-32289 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG4684 (Uncharacterized membrane protein ), PGM2 (cd05799), RVT-GII

Seq: LBHI01000082.1 Streptococcus agalactiae strain DK-B-USS-146 ctg7180000003668, whole genome shotgun sequence (52997 bp)
Overview 1 RT 1: 47386-52994 bp Neighborhood of RT #1 [47386, 52997] Der HepA RVT-GII Feature: gene Location: 47386-48696 bp Feature: domain Description: Der Location: 47389-48694 bp Feature: domain Description: Der Location: 47389-48694 bp Feature: gene Location: 48852-51950 bp Feature: domain Description: HepA Location: 50250-51942 bp Feature: domain Description: HepA Location: 502 50-51942 bp Feature: gene Location: 52523-52997 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52727-52994 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 52 72 7-52 994 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Der (COG1160), HepA (COG0553), RVT-GII

Seq: LBHI01000080.1 Streptococcus agalactiae strain DK-B-USS-146 ctg7180000003666, whole genome shotgun sequence (37319 bp)
Overview 1 RT 1: 35112-37316 bp Neighborhood of RT #1 [35112, 37319] miaA DUF3042 RVT-GII Feature: gene Location: 35112-36002 bp Feature: domain Description: miaA Location: 35118-35985 bp Feature: domain Description: miaA Location: 3 5118-3 5985 bp Feature: gene Location: 36113-36289 bp Feature: domain Description: DUF3042 Location: 36131-36284 bp Feature: domain Description: DUF3 042 Location: 3 613 1-3 6284 bp Feature: gene Location: 36845-37319 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 37049-37316 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 3 7049-3 73 16 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT miaA (TIGR00174), DUF3042 (pfam11240), RVT-GII

Seq: LBHI01000002.1 Streptococcus agalactiae strain DK-B-USS-146 ctg7180000003587, whole genome shotgun sequence (39636 bp)
Overview 1 RT 1: 36177-39633 bp Neighborhood of RT #1 [36177, 39636] Cof PRK10416 RVT-GII Feature: gene Location: 36177-37001 bp Feature: domain Description: Cof Location: 36186-36987 bp Feature: domain Description: Cof Location: 36186-36987 bp Feature: gene Location: 37001-38611 bp Feature: domain Description: PRK10416 Location: 37340-38600 bp Feature: domain Description: PRK104 16 Location: 3734 0-38600 bp Feature: gene Location: 39162-39636 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39366-39633 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 39366-39633 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT Cof (COG0561), PRK10416 (signal recognition particle-docking protein FtsY; Provisional), RVT-GII

Seq: LBHI01000046.1 Streptococcus agalactiae strain DK-B-USS-146 ctg7180000003632, whole genome shotgun sequence (11642 bp)
Overview 1 RT 1: 1-2797 bp Neighborhood of RT #1 [1, 2797] RVT_N RVT-GII GIIM Feature: gene Location: 1-1485 bp Feature: RT Description: RVT_N Location: 4-115 bp Feature: RT Description: RVT_N Location: 4-115 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 160-808 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 160-808 bp Feature: domain Description: GIIM Note: maturase Location: 865-1093 bp Feature: domain Description: GIIM Note: maturase Location: 865 -1093 bp Feature: gene Location: 1619-2428 bp Feature: gene Location: 2498-2797 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT RVT_N (pfam13655), RVT-GII, GIIM (pfam08388)

Seq: LBHI01000005.1 Streptococcus agalactiae strain DK-B-USS-146 ctg7180000003590, whole genome shotgun sequence (7616 bp)
Overview 1 RT 1: 3036-7613 bp Neighborhood of RT #1 [3036, 7616] PRK12267 Branch_AA_trans RVT-GII Feature: gene Location: 3036-5033 bp Feature: domain Description: PRK12267 Location: 3045-5028 bp Feature: domain Description: PRK1226 7 Location: 3045-5028 bp Feature: gene Location: 5228-6565 bp Feature: domain Description: Branch_AA_trans Location: 5237-6521 bp Feature: domain Description: Branch_AA_trans Location: 5237-6 521 bp Feature: gene Location: 7142-7616 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7346-7613 bp Feature: RT Description: RVT-GII Note: GII (Group II introns RT) Location: 7346 -76 13 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT PRK12267 (methionyl-tRNA synthetase; Reviewed), Branch_AA_trans (pfam05525), RVT-GII