myRT

myRT report for GCA_001020565.1_ASM102056v1

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Seq: LDAS01000001.1 Maribacter thermophilus strain HT7-2 Scaffold1, whole genome shotgun sequence (4049130 bp)
Overview 1 RT 1: 2048186-2051817 bp 2 RT 2: 3769952-3779165 bp Neighborhood of RT #1 [2048186, 2051903] HTH_XRE RVT-Retrons SMI1_KNR4 2a38 Neighborhood of RT #2 [3769952, 3779165] RMtype1_S_Fco49512ORF2615P-TRD2-CR2_like RMtype1_S_Fco49512ORF2615P-TRD2-CR2_like COG0610 RVT-UG5 Feature: gene Location: 2048186-2048422 bp Feature: gene Location: 2048461-2048751 bp Feature: domain Description: HTH_XRE Location: 2048473-2048635 bp Feature: domain Description: HTH_XRE Location: 2048473-2048635 bp Feature: gene Location: 2048761-2049615 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2048932-2049448 bp Feature: RT Description: RVT-Retrons Note: Retrons RT Location: 2048932-2049448 bp Feature: gene Location: 2049837-2050319 bp Feature: domain Description: SMI1_KNR4 Location: 2049933-2050281 bp Feature: domain Description: SMI1 _KNR4 Location: 2049933-2050281 bp Feature: gene Location: 2050551-2051903 bp Feature: domain Description: 2a38 Location: 2050671-2051817 bp Feature: domain Description: 2a38 Location: 2050671 -2051 81 7 bp Feature: gene Location: 3769952-3771112 bp Feature: domain Description: RMtype1_S_Fco49512ORF2615P-TRD2-CR2_like Location: 3770003-3770486 bp Feature: domain Description: RMtype1 _S_Fco4951 2ORF261 5P-TRD2-CR2_like Location: 3770003-3770486 bp Feature: domain Description: RMtype1_S_Fco49512ORF2615P-TRD2-CR2_like Location: 3770726-3771077 bp Feature: domain Description: RMtype1 _S_Fco4951 2ORF261 5P-TRD2-CR2_like Location: 3770726-3771 077 bp Feature: gene Location: 3771118-3774225 bp Feature: domain Description: COG0610 Location: 3771211-3774202 bp Feature: domain Description: COG061 0 Location: 3771 21 1 -3774202 bp Feature: gene Location: 3774447-3777443 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 3774915-3775353 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 377491 5-3775353 bp Feature: gene Location: 3777987-3778307 bp Feature: gene Location: 3778308-3779165 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT HTH_XRE (smart00530), RVT-Retrons, SMI1_KNR4 (smart00860), 2a38 (TIGR00933), RMtype1_S_Fco49512ORF2615P-TRD2-CR2_like (cd17255), COG0610 (Type I site-specific restriction-modification system, R (restriction) subunit and related helicases ), RVT-UG5