myRT

myRT report for GCA_001020715.1_ASM102071v1

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Seq: LCZB01000052.1 Pseudomonas fluorescens strain AU11706 Contig_118, whole genome shotgun sequence (79254 bp)
Overview 1 RT 1: 70761-74506 bp Neighborhood of RT #1 [70761, 74506] DUF1566 Avd_like RVT-DGRs DnaJ_CXXCXGXG DnaJ_CXXCXGXG Feature: gene Location: 70761-71372 bp Feature: domain Description: DUF1566 Location: 71001-71355 bp Feature: domain Description: DUF1 566 Location: 71 001 -71 355 bp Feature: gene Location: 71427-71783 bp Feature: domain Description: Avd_like Location: 71454-71763 bp Feature: domain Description: Avd_like Location: 71 454-71 763 bp Feature: gene Location: 71987-73147 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 72239-72923 bp Feature: RT Description: RVT-DGRs Note: DGRs RT Location: 72239-72923 bp Feature: gene Location: 73378-74094 bp Feature: domain Description: DnaJ_CXXCXGXG Location: 73771-73921 bp Feature: domain Description: DnaJ_CXXCXGXG Location: 73771 -73921 bp Feature: domain Description: DnaJ_CXXCXGXG Location: 73963-74086 bp Feature: domain Description: DnaJ_CXXCXGXG Location: 73963-74086 bp Feature: gene Location: 74087-74506 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT DUF1566 (pfam07603), Avd_like (cd16376), RVT-DGRs, DnaJ_CXXCXGXG (pfam00684)

Seq: LCZB01000083.1 Pseudomonas fluorescens strain AU11706 Contig_7, whole genome shotgun sequence (29650 bp)
Overview 1 RT 1: 8515-16722 bp Neighborhood of RT #1 [8515, 20018] COG3950 YeeA RVT-UG5 YeeA PRK08939 Feature: gene Location: 8515-9789 bp Feature: domain Description: COG3950 Location: 8518-9619 bp Feature: domain Description: COG3950 Location: 8518-9619 bp Feature: gene Location: 9793-11496 bp Feature: domain Description: YeeA Location: 10471-11236 bp Feature: domain Description: YeeA Location: 10471-112 36 bp Feature: gene Location: 11493-14495 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 11985-12462 bp Feature: RT Description: RVT-UG5 Note: UG5 RT Location: 11985-12 462 bp Feature: gene Location: 14593-16392 bp Feature: domain Description: YeeA Location: 15181-16318 bp Feature: domain Description: YeeA Location: 15181-16318 bp Feature: gene Location: 16461-20018 bp Feature: domain Description: PRK08939 Location: 16578-16722 bp Feature: domain Description: PRK08939 Location: 16578-1672 2 bp Sorry, your browser does not support inline SVG.
Associated domains:myRT COG3950 (Predicted ATP-binding protein involved in virulence ), YeeA (COG1002), RVT-UG5, PRK08939 (primosomal protein DnaI; Reviewed)